RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 FAM222BQ8WU58 562 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 CACNG8Q8WXS5 425 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 MRAP2Q96G30 205 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 ADTRPQ96IZ2 230 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 PLA2G2FQ9BZM2 168 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 FGF23Q9GZV9 251 aaPredicted RBP5.47□□□□□ -1.53
USP28-207ENST00000538475 RNASE7Q9H1E1 156 aaKnown RBP5.47□□□□□ -1.53
USP28-207ENST00000538475 ENY2Q9NPA8 101 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 FGF21Q9NSA1 209 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 SERTAD4Q9NUC0 356 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 KLF12Q9Y4X4 402 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 HLA-DRB4X5D2U9 266 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 FREM1Q5H8C1 2179 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 PCSK5Q92824 1860 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PPIAL4EA0A075B759 164 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 IGHV1OR21-1A0A087WYE8 117 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 LOC102723996A0A087X1L8 192 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PPIAL4CA0A0B4J2A2 164 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 TRBV6-1A0A0K0K1D8 114 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 A0A1W2PR80 420 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PCNX2A6NKB5 2137 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 VSTM5A8MXK1 200 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 OR11H12B2RN74 326 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PPIAL4DF5H284 164 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 SYNGR1O43759 233 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 OR2H2O95918 312 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 NGFP01138 241 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 APOA2P02652 100 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 CA3P07451 260 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 SP1P08047 785 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 FRMD6-AS1P0C7T7 363 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 SMIM13P0DJ93 91 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PPIAL4FP0DN26 164 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 MYF5P13349 255 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 B4GALT1P15291 398 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 AZU1P20160 251 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 FOXA3P55318 350 aaPredicted RBP5.46□□□□□ -1.54
USP28-207ENST00000538475 HSPE1P61604 102 aaKnown RBP5.46□□□□□ -1.54
USP28-207ENST00000538475 RPL30P62888 115 aaKnown RBP5.46□□□□□ -1.54
USP28-207ENST00000538475 ZNF816Q0VGE8 651 aaPredicted RBP5.46□□□□□ -1.54
USP28-207ENST00000538475 C1orf61Q13536 156 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 TAL2Q16559 108 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 C5orf64Q2M2E5 130 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PRAMEF5Q5TYX0 476 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PRAMEF6Q5VXH4 476 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 LYSMD4Q5XG99 296 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 RBPMS2Q6ZRY4 209 aaKnown RBP5.46□□□□□ -1.54
USP28-207ENST00000538475 SSX8Q7RTT4 187 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 TPRX1Q8N7U7 411 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 TSTD1Q8NFU3 115 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 OR11H1Q8NG94 326 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 OR1L4Q8NGR5 311 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 OR11H2Q8NH07 326 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 OR9G1Q8NH87 305 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 C8orf46Q8TAG6 207 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 URB1-AS1Q96HZ7 61 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 AJUBAQ96IF1 538 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 ZNF714Q96N38 554 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 C8orf49Q96NF6 230 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 NABP2Q9BQ15 211 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 PRSS22Q9GZN4 317 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 WDR54Q9H977 334 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 CLCF1Q9UBD9 225 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 RARRES3Q9UL19 164 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 FOXA2Q9Y261 457 aaPredicted RBP5.46□□□□□ -1.54
USP28-207ENST00000538475 SPCS1Q9Y6A9 102 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 CNTRLQ7Z7A1 2325 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 ASXL3Q9C0F0 2248 aa5.46□□□□□ -1.54
USP28-207ENST00000538475 LOC102724200A0A096LPH7 203 aaPredicted RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 hDV102S1A0JD36 115 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 C15orf61A6NNL5 157 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 INS-IGF2F8WCM5 200 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 MGST1P10620 155 aaKnown RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 FGF6P10767 208 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 GABRG2P18507 467 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 GATA2P23769 480 aaPredicted RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 MC5RP33032 325 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 BRWD1-AS2P59051 145 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 CKS1BP61024 79 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 RPL8P62917 257 aaKnown RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 TMEM30BQ3MIR4 351 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 Q6AWC8 147 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 RPRMLQ8N4K4 120 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 GCSAMQ8N6F7 178 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 ATP6V0E2Q8NHE4 81 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 ZNF502Q8TBZ5 544 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 LRRC29Q8WV35 223 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 SNRNP40Q96DI7 357 aaKnown RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 SLC25A33Q9BSK2 321 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 RPP21Q9H633 154 aaKnown RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 DEPPQ9NTK1 212 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 JPT1Q9UK76 154 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 TCF19Q9Y242 345 aa5.45□□□□□ -1.54
USP28-207ENST00000538475 AMMECR1Q9Y4X0 333 aaPredicted RBP5.45□□□□□ -1.54
USP28-207ENST00000538475 A0A087X0K7 114 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 hADV38S2A0JD32 116 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 HIGD1CA8MV81 97 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 GGTLC3B5MD39 225 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms