RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 B4DSR2 109 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 TBX6O95947 436 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-205ENST00000538291 FBLN7Q53RD9 439 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 SDHCQ99643 169 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-205ENST00000538291 FAM166AQ6J272 317 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 NUDT11Q96G61 164 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 PARD6GQ9BYG4 376 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-205ENST00000538291 ERVH48-1M5A8F1 160 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 PGPEP1Q9NXJ5 209 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 HEATR5BQ9P2D3 2071 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 OVOL1O14753 267 aa13.97□□□□□ -0.17
SCARB1-205ENST00000538291 IGKV1-9A0A0C4DH69 117 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 HIGD1CA8MV81 97 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 SAP30O75446 220 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 DUTP33316 252 aaKnown RBP13.96□□□□□ -0.17
SCARB1-205ENST00000538291 NAT1P18440 290 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 GNG5P63218 68 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 C18orf12Q96KH6 178 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 EFNB1P98172 346 aa13.96□□□□□ -0.17
SCARB1-205ENST00000538291 IMMP2LQ96T52 175 aa13.96□□□□□ -0.18
SCARB1-205ENST00000538291 LINC00527Q9UJ94 153 aa13.96□□□□□ -0.18
SCARB1-205ENST00000538291 ZNF257Q9Y2Q1 563 aa13.96□□□□□ -0.18
SCARB1-205ENST00000538291 SLC25A20O43772 301 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 KIR3DL3Q8N743 410 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 EPDR1Q9UM22 224 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 FAM90A9PA6NNJ1 464 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 ZNF815PA8K554 130 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 TSPAN13O95857 204 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
SCARB1-205ENST00000538291 RAMP3O60896 148 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 CYB5R2Q6BCY4 276 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 UBE2DNLQ8IWF7 75 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 RPUSD1Q9UJJ7 312 aaKnown RBP13.95□□□□□ -0.18
SCARB1-205ENST00000538291 SCN2AQ99250 2005 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 IGHV2-26A0A0B4J1V2 119 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 CCL20P78556 96 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 PSG8Q9UQ74 426 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 SRRM5B3KS81 715 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 VMO1Q7Z5L0 202 aa13.95□□□□□ -0.18
SCARB1-205ENST00000538291 MPTX1A8MV57 137 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 NDUFA3O95167 84 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 OOSP1A8MZH6 123 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 SIGLEC15Q6ZMC9 328 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 IGKV3D-20A0A0C4DH25 116 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 MINOS1Q5TGZ0 78 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 FGFBP3Q8TAT2 258 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 CHCHD5Q9BSY4 110 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 MINOS1-NBL1R4GNA1 71 aa13.94□□□□□ -0.18
SCARB1-205ENST00000538291 DPH3P1Q9H4G8 78 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 PEF1Q9UBV8 284 aaKnown RBP13.93□□□□□ -0.18
SCARB1-205ENST00000538291 PIKFYVEQ9Y2I7 2098 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 A0A1W2PRE2 83 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 CRYGSP22914 178 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 CD33P20138 364 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 ZNF324BQ6AW86 544 aaPredicted RBP13.93□□□□□ -0.18
SCARB1-205ENST00000538291 FAM89BQ8N5H3 189 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 GGNQ86UU5 652 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 OR9G4Q8NGQ1 327 aa13.93□□□□□ -0.18
SCARB1-205ENST00000538291 PYYP10082 97 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 ZNF415Q09FC8 603 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 MESP1Q9BRJ9 268 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 ALPK2Q86TB3 2170 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 DOPEY2Q9Y3R5 2298 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 HEPN1Q6WQI6 88 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 CRIPAKQ8N1N5 446 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 CD5P06127 495 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 IGHV1-8P0DP01 117 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 SRD5A1P18405 259 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 SRSF1Q07955 248 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■□□□ 11.8
SCARB1-205ENST00000538291 APOMO95445 188 aa13.92□□□□□ -0.18
SCARB1-205ENST00000538291 TMEM219Q86XT9 240 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 ZNF319Q9P2F9 582 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 CARHSP1Q9Y2V2 147 aaKnown RBP13.91□□□□□ -0.18
SCARB1-205ENST00000538291 TMEM178BH3BS89 294 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 LYPD3O95274 346 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 PPBPP02775 128 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 ERVK11-1P61568 191 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 DEFB121Q5J5C9 76 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 RNASE7Q9H1E1 156 aaKnown RBP13.91□□□□□ -0.18
SCARB1-205ENST00000538291 SEPSECSQ9HD40 501 aaKnown RBP13.91□□□□□ -0.18
SCARB1-205ENST00000538291 FOXG1P55316 489 aaPredicted RBP13.91□□□□□ -0.18
SCARB1-205ENST00000538291 C15orf32Q32M92 178 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 TPTE2P1Q5T6R2 138 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 BEND2Q8NDZ0 799 aa13.91□□□□□ -0.18
SCARB1-205ENST00000538291 ST6GALNAC3Q8NDV1 305 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 RNF222A6NCQ9 220 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 TMEM200BQ69YZ2 307 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 C10orf126Q8N4M7 172 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 PRADC1Q9BSG0 188 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 NXT2Q9NPJ8 142 aaKnown RBP13.9□□□□□ -0.18
SCARB1-205ENST00000538291 H3BUX3 64 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 SNAI2O43623 268 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 RNF5Q99942 180 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 CD55P08174 381 aa13.9□□□□□ -0.18
SCARB1-205ENST00000538291 MBNL3Q9NUK0 354 aaKnown RBP13.9□□□□□ -0.18
SCARB1-205ENST00000538291 A0A087WWC5 75 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms