RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 Q8N7P7 452 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF439Q8NDP4 499 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 LSM10Q969L4 123 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 SLC25A38Q96DW6 304 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF747Q9BV97 191 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 OR51J1Q9H342 316 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF257Q9Y2Q1 563 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 C2CD3Q4AC94 2353 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 CHD3Q12873 2000 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 ARFGEF3Q5TH69 2177 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 USF3Q68DE3 2245 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 DYSFO75923 2080 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 C13orf42A0A1B0GVH6 325 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1W2PRD5 423 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1W2PRF3 423 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1W2PRM7 423 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 PSMB11A5LHX3 300 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 HOXA3O43365 443 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 OR2A4O95047 310 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 GCGP01275 180 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 SNCAP37840 140 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 RPL27AP46776 148 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 RPL23AP62750 156 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 RHOGP84095 191 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM241Q24JQ0 296 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 TDRG1Q3Y452 100 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 OR52E5Q8NH55 327 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 OR2A7Q96R45 310 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 FOXA2Q9Y261 457 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 HILPDAQ9Y5L2 63 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 WDR87Q6ZQQ6 2873 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 LY6LH3BQJ8 138 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BKO60814 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IGKV1D-33P01593 117 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IGKV1-33P01594 117 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 EIF4EP06730 217 aaKnown RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BJP06899 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SULT1A3P0DMM9 295 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SULT1A4P0DMN0 295 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BOP23527 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BBP33778 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 MYCNOSP40205 109 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 INSL3P51460 131 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 LOXL3P58215 753 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BDP58876 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BCP62807 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 PAFAH1B2P68402 229 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 GAGE5Q13069 117 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 GAGE6Q13070 117 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST2H2BEQ16778 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SPRNQ5BIV9 151 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM128Q5BJH2 165 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OXLD1Q5BKU9 147 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SPATA31B1PQ5VZV4 182 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 TMUB2Q71RG4 321 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 Q8N2B8 174 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 DRAM1Q8N682 238 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OR9G4Q8NGQ1 327 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OR51H1Q8NH63 302 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OR56B4Q8NH76 319 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM167AQ8TBQ9 72 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BHQ93079 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BNQ99877 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BMQ99879 126 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 C20orf144Q9BQM9 153 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 MIEN1Q9BRT3 115 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SLC25A31Q9H0C2 315 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 RPS10P5Q9NQ39 176 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 UNC80Q8N2C7 3258 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SPTBN5Q9NRC6 3674 aaKnown RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SMIM9A6NGZ8 99 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 F8VVB4 439 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 F8VWA3 439 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 NDUFA3O95167 84 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IGHG2P01859 326 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IGHV4-38-2P0DP08 117 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 CRIP2P52943 208 aaPredicted RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 FXYD4P59646 89 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 RPL8P62917 257 aaKnown RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 KRTAP1-1Q07627 177 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 CT45A1Q5HYN5 189 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 KCNIP4Q6PIL6 250 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OR1S2Q8NGQ3 325 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OR2K2Q8NGT1 345 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 OR52I2Q8NH67 350 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 CT45A3Q8NHU0 189 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 ARPC1AQ92747 370 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 GFI1Q99684 422 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IFI27L2Q9H2X8 130 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 NAA60Q9H7X0 242 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 PLEKHA3Q9HB20 300 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 UQCC1Q9NVA1 299 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 PEMTQ9UBM1 199 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 GPR132Q9UNW8 380 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms