RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HEPN1Q6WQI6 88 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 MBNL3Q9NUK0 354 aaKnown RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1D-17A0A075B6S4 117 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 WT1P19544 449 aaPredicted RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 KIAA1644Q3SXP7 199 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 ZNF660Q6AZW8 331 aaPredicted RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 PVRIGQ6DKI7 326 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 TXNDC17Q9BRA2 123 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1D-8A0A087WSZ0 117 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 TRGV4A0A0C4DH28 118 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 IFITM10A6NMD0 228 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 LGALS3P17931 250 aaKnown RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 GPX4P36969 197 aaPredicted RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 CACNG8Q8WXS5 425 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 HIST1H2BAQ96A08 127 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 FMC1Q96HJ9 113 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 HEATR5BQ9P2D3 2071 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 CR1LQ2VPA4 569 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 TEX38Q6PEX7 206 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 SLC25A48Q6ZT89 311 aaKnown RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 TGIF2-C20orf24A0A0A6YYL0 155 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 H7C1H1 209 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 J3QRE1 110 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 DUSP14O95147 198 aaKnown RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 RIPPLY3P57055 190 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 KLF17Q5JT82 389 aaPredicted RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 STPG2Q8N412 459 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 RAB37Q96AX2 223 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 TBL2Q9Y4P3 447 aaKnown RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 RNF114Q9Y508 228 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 DANCRP0C864 163 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 OR11H4Q8NGC9 324 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 SDK2Q58EX2 2172 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 C7orf71A4D174 169 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 TNFSF13O75888 250 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 OTX1P32242 354 aaPredicted RBP4.41□□□□□ -1.7
LRP6-203ENST00000538239 ATP5G3P48201 142 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 PRCDQ00LT1 54 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 C2orf68Q2NKX9 166 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 PROK2Q9HC23 129 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 AHCTF1Q8WYP5 2266 aa4.41□□□□□ -1.7
LRP6-203ENST00000538239 PLXNA2O75051 1894 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 PYYP10082 97 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 TMEM155Q4W5P6 130 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 ZNRD1Q9P1U0 126 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 NAT1P18440 290 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 SAMD13Q5VXD3 122 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 OR4D5Q8NGN0 318 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 ZNF256Q9Y2P7 627 aaPredicted RBP4.4□□□□□ -1.7
LRP6-203ENST00000538239 IGKV3D-20A0A0C4DH25 116 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 H0YJW9 148 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 TDGF1P13385 188 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 GRNP28799 593 aaKnown RBP4.4□□□□□ -1.7
LRP6-203ENST00000538239 ACTL10Q5JWF8 245 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 RNF144BQ7Z419 303 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 NR2C2APQ86WQ0 139 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 GFI1Q99684 422 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 PSMG3Q9BT73 122 aaPredicted RBP4.4□□□□□ -1.7
LRP6-203ENST00000538239 OTORQ9NRC9 128 aa4.4□□□□□ -1.7
LRP6-203ENST00000538239 AGAP20933 346 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 SRIP30626 198 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 RCC1LQ96I51 464 aaKnown RBP4.4□□□□□ -1.71
LRP6-203ENST00000538239 SLC50A1Q9BRV3 221 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 ZMAT5Q9UDW3 170 aaKnown RBP4.4□□□□□ -1.71
LRP6-203ENST00000538239 DIRC3C9JPN6 131 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 FAM209BQ5JX69 171 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 C1orf122Q6ZSJ8 110 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 ZNF581Q9P0T4 197 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 PAM16Q9Y3D7 125 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 TRAV3A0A0B4J244 114 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 WISP1O95388 367 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 MALP21145 153 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
LRP6-203ENST00000538239 LINC00205P59089 165 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 TMEM144Q7Z5S9 345 aa4.4□□□□□ -1.71
LRP6-203ENST00000538239 SLC17A3O00476 420 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 CEACAM8P31997 349 aaPredicted RBP4.39□□□□□ -1.71
LRP6-203ENST00000538239 C5orf64Q2M2E5 130 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 Q6P435 159 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 REC114Q7Z4M0 266 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 OR13C6PQ8NH95 151 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 VGLL1Q99990 258 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 TOMM7Q9P0U1 55 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 APC2O95996 2303 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 ADAMTS9Q9P2N4 1935 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 NOTCH4Q99466 2003 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 CD8AP01732 235 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 FAM169BQ8N8A8 192 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 SMDT1Q9H4I9 107 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 FER1L5A0AVI2 2057 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 IGHV3-73A0A0B4J1V6 119 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 HLA-DQA1P01909 254 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 GATA4P43694 442 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 HBBP68871 147 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 GCSAMLQ5JQS6 135 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms