RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NAV3Q8IVL0 2385 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 A0A1W2PPQ1 181 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 OR7C2O60412 319 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 LY6HO94772 140 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 SOD3P08294 240 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 COMPP49747 757 aaPredicted RBP9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 TNXAQ16473 311 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 ETFRF1Q6IPR1 90 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 RPEQ96AT9 228 aa9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 MRPL36Q9P0J6 103 aaKnown RBP9.16□□□□□ -0.94
SLC28A1-204ENST00000538177 MDFIC2A0A1B0GVS7 189 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 REG1AP05451 166 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 MFAP2P55001 183 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 S100A12P80511 92 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 PAX2Q02962 417 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 CLEC12BQ2HXU8 276 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 C4orf17Q53FE4 359 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 PPP1R27Q86WC6 154 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 BTF3L4Q96K17 158 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 PFDN5Q99471 154 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 ONECUT1Q9UBC0 465 aa9.15□□□□□ -0.94
SLC28A1-204ENST00000538177 SFTPCP11686 197 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 ZNF90Q03938 601 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 HCP5Q6MZN7 132 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 TEX38Q6PEX7 206 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 PATE2Q6UY27 113 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 HIST3H2BBQ8N257 126 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 OR11H6Q8NGC7 330 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 OR1L4Q8NGR5 311 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 SLC25A2Q9BXI2 301 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 GAR1Q9NY12 217 aaKnown RBP9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 TEX22C9J3V5 150 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 COX7A2P2O60397 106 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 IGHV3-48P01763 117 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 GFI1BQ5VTD9 330 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 MORN5Q5VZ52 161 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 OR10G8Q8NGN5 311 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 PRORYQ9H606 182 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 PITPNC1Q9UKF7 332 aa9.14□□□□□ -0.95
SLC28A1-204ENST00000538177 COL6A6A6NMZ7 2263 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 TRAV5A0A0B4J249 113 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 GGTLC3B5MD39 225 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 K7EN84 100 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 M0R1W7 72 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 OR10J4P0C629 311 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 CRYBB3P26998 211 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 SSX2Q16385 188 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 LDLRAD2Q5SZI1 272 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 C10orf113Q5VZT2 155 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 TMEM116Q8NCL8 245 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 TRGV9Q99603 122 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 HELTA6NFD8 242 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 CORTO00230 105 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 S100A2P29034 98 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 BPIFB3P59826 476 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 ARF6P62330 175 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 SUMO1P63165 101 aaKnown RBP9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 OR5AU1Q8NGC0 362 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 SGMS2Q8NHU3 365 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 MISP3Q96FF7 219 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 GPR61Q9BZJ8 451 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 FBXL15Q9H469 300 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 ZNF355PQ9NSJ1 428 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 F11RQ9Y624 299 aaKnown RBP9.13□□□□□ -0.95
SLC28A1-204ENST00000538177 LOC105371242A0A075B767 164 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 PRTN3P24158 256 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 HTR1DP28221 377 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 LY6DQ14210 128 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 COA6Q5JTJ3 125 aaKnown RBP9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 SSBP3Q9BWW4 388 aaPredicted RBP9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 NIT2Q9NQR4 276 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 FCN1O00602 326 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 TIMM23O14925 209 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 HNF1AP20823 631 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 RPL15P61313 204 aaKnown RBP9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 UBE2L3P68036 154 aaKnown RBP9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 C22orf15Q8WYQ4 148 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 PAXXQ9BUH6 204 aa9.12□□□□□ -0.95
SLC28A1-204ENST00000538177 TRAV9-1A0A075B6T8 112 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 A0A0U1RQK1 487 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 ZNF320A2RRD8 509 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 ODF3BA8MYP8 253 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 GNG4P50150 75 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 C19orf35Q6ZS72 473 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 C1orf122Q6ZSJ8 110 aa9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 SRSF12Q8WXF0 261 aaKnown RBP9.11□□□□□ -0.95
SLC28A1-204ENST00000538177 CFHR4Q92496 578 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms