RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 OR7C1O76099 320 aaPredicted RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 S1PR2O95136 353 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 DUSP14O95147 198 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 HLA-AP01891 365 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 SNRPCP09234 159 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 APELAP0DMC3 54 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 CT45A6P0DMU7 189 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 CT45A5P0DMU8 189 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 CT45A7P0DMV0 189 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 RCC1P18754 421 aaPredicted RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 RAB4AP20338 218 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 CD40LGP29965 261 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 PPP1CCP36873 323 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 KRTAP10-8P60410 259 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 ACTR3P61158 418 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 PJVKQ0ZLH3 352 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 TATDN3Q17R31 274 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 MORN2Q502X0 79 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 TP53I3Q53FA7 332 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 RPL39P5Q59GN2 51 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 YIF1BQ5BJH7 314 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 SAPCD1Q5SSQ6 148 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 SYT6Q5T7P8 510 aaPredicted RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF691Q5VV52 312 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF562Q6V9R5 426 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 OR52B4Q8NGK2 314 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 OR2G2Q8NGZ5 317 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 OR4K15Q8NH41 348 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 OR4A16Q8NH70 328 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 KCNG3Q8TAE7 436 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 UFD1Q92890 307 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 LINC00167Q96N53 147 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 IFI27L2Q9H2X8 130 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 Q9H521 79 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 NRN1Q9NPD7 142 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 IFT46Q9NQC8 304 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 NUDT15Q9NV35 164 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 METTL1Q9UBP6 276 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF230Q9UIE0 474 aaPredicted RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 ST3GAL6Q9Y274 331 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 TMEM213A2RRL7 107 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 LINC00862A6NCI5 91 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 C5orf51A6NDU8 294 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 C16orf90A8MZG2 172 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 H0Y9J4 135 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 CDRT1O95170 752 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 FADS2O95864 444 aaKnown RBP3.58□□□□□ -1.84
CLIP1-207ENST00000536634 PRH1P02810 166 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 IGKV1-16P04430 117 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 IFNA4P05014 189 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 ISG15P05161 165 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 FABP1P07148 127 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 APOC4P55056 127 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 RBM11P57052 281 aaKnown RBP3.58□□□□□ -1.84
CLIP1-207ENST00000536634 TCTAP57738 103 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 ZNF85Q03923 595 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 EXOSC2Q13868 293 aaKnown RBP3.58□□□□□ -1.84
CLIP1-207ENST00000536634 ZNF846Q147U1 533 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 FXYD3Q14802 87 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 PSG5Q15238 335 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 RBMY1FQ15415 496 aaKnown RBP3.58□□□□□ -1.84
CLIP1-207ENST00000536634 TMEM244Q5VVB8 128 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 UBE2UQ5VVX9 321 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 ZNF57Q68EA5 555 aaPredicted RBP3.58□□□□□ -1.84
CLIP1-207ENST00000536634 RAB12Q6IQ22 244 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 ZNF767PQ75MW2 155 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 PXT1Q8NFP0 134 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 OR10H4Q8NGA5 316 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 OR51A2Q8NGJ7 313 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 TNFAIP8L1Q8WVP5 186 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 SPACA1Q9HBV2 294 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 OR2S2Q9NQN1 319 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 PRO0461Q9UI25 63 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 GNG8Q9UK08 70 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 RAB26Q9ULW5 256 aa3.58□□□□□ -1.84
CLIP1-207ENST00000536634 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.57□□□□□ -1.84
CLIP1-207ENST00000536634 KIR2DL5BA0A0G2JN68 375 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 KIR2DL5BA0A0G2JPC4 375 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 OR4C45A6NMZ5 311 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 NACAE9PAV3 2078 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 NUPL2O15504 423 aaKnown RBP3.57□□□□□ -1.84
CLIP1-207ENST00000536634 CBLN1P23435 193 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 GK3PQ14409 553 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 RSU1Q15404 277 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 C2orf83Q53S99 150 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 NXNL2Q5VZ03 156 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 DMKNQ6E0U4 476 aaPredicted RBP3.57□□□□□ -1.84
CLIP1-207ENST00000536634 ASCL4Q6XD76 172 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 KIR2DL5AQ8N109 375 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 GAPTQ8N292 157 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 KIR2DL5BQ8NHK3 375 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 NEK7Q8TDX7 302 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 GHSRQ92847 366 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 MRPS24Q96EL2 167 aaKnown RBP3.57□□□□□ -1.84
CLIP1-207ENST00000536634 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 C11orf68Q9H3H3 251 aaKnown RBP3.57□□□□□ -1.84
CLIP1-207ENST00000536634 TAF9BQ9HBM6 251 aa3.57□□□□□ -1.84
CLIP1-207ENST00000536634 TRAPPC2LQ9UL33 140 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms