RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 HINT2Q9BX68 163 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 NAA60Q9H7X0 242 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 C21orf62Q9NYP8 219 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 MRPL27Q9P0M9 148 aaKnown RBP9.36□□□□□ -0.91
PRKDC-207ENST00000536483 S4R3C0 116 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 K7EMT4 169 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 NDUFA4O00483 81 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 JTBO76095 146 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 CTSGP08311 255 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 SULT1A3P0DMM9 295 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 SULT1A4P0DMN0 295 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 ADMP35318 185 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 CCR6P51684 374 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 ERHP84090 104 aaKnown RBP9.35□□□□□ -0.91
PRKDC-207ENST00000536483 BSXQ3C1V8 233 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 SP6Q3SY56 376 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 UNQ9165/PRO28630Q6UXU0 137 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 IL22RA2Q969J5 263 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 CACFD1Q9UGQ2 172 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 C14orf166Q9Y224 244 aaKnown RBP9.35□□□□□ -0.91
PRKDC-207ENST00000536483 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
PRKDC-207ENST00000536483 A0A0G2JRQ6 117 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 ST8SIA3O43173 380 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 OR5AC1P0C628 307 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 C4BPBP20851 252 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 Q6ZRM9 215 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
PRKDC-207ENST00000536483 UXS1Q8NBZ7 420 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 LHFPL5Q8TAF8 219 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 RBPMSQ93062 196 aaKnown RBP9.34□□□□□ -0.91
PRKDC-207ENST00000536483 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 RRNAD1Q96FB5 475 aaKnown RBP9.34□□□□□ -0.91
PRKDC-207ENST00000536483 FAM210AQ96ND0 272 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 CHRDL1Q9BU40 450 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 HIPK2Q9H2X6 1198 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 PLEKHA3Q9HB20 300 aa9.34□□□□□ -0.91
PRKDC-207ENST00000536483 ZNF320A2RRD8 509 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 C15orf62A8K5M9 175 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 SSNA1O43805 119 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 EDN2P20800 178 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 AKR1C2P52895 323 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 CD81P60033 236 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 SPCS3P61009 180 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 TMEM187Q14656 261 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 FCN2Q15485 313 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 OR10C1Q96KK4 312 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
PRKDC-207ENST00000536483 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
PRKDC-207ENST00000536483 MLXQ9UH92 298 aa9.33□□□□□ -0.92
PRKDC-207ENST00000536483 CORTO00230 105 aa9.32□□□□□ -0.92
PRKDC-207ENST00000536483 GIPP09681 153 aaPredicted RBP9.32□□□□□ -0.92
PRKDC-207ENST00000536483 MFAP4P55083 255 aa9.32□□□□□ -0.92
PRKDC-207ENST00000536483 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
PRKDC-207ENST00000536483 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
PRKDC-207ENST00000536483 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
PRKDC-207ENST00000536483 KCNIP3Q9Y2W7 256 aa9.32□□□□□ -0.92
PRKDC-207ENST00000536483 ALMS1Q8TCU4 4167 aa9.32□□□□□ -0.92
PRKDC-207ENST00000536483 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 PIGBOS1A0A0B4J2F0 54 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 MT-CO2P00403 227 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 IFNA17P01571 189 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 CD7P09564 240 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
PRKDC-207ENST00000536483 SNCAP37840 140 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 SUB1P53999 127 aaKnown RBP eCLIP9.31□□□□□ -0.924e-6■■□□□ 11.8
PRKDC-207ENST00000536483 UBE2MP61081 183 aaKnown RBP9.31□□□□□ -0.92
PRKDC-207ENST00000536483 RAP2BP61225 183 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 RELQ04864 619 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-207ENST00000536483 NMSQ5H8A3 153 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 SLC35G3Q8N808 338 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 CACNG8Q8WXS5 425 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 GPR146Q96CH1 333 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 WDR89Q96FK6 387 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-207ENST00000536483 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
PRKDC-207ENST00000536483 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
PRKDC-207ENST00000536483 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
PRKDC-207ENST00000536483 TSPAN4O14817 238 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 NUPL2O15504 423 aaKnown RBP9.3□□□□□ -0.92
PRKDC-207ENST00000536483 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
PRKDC-207ENST00000536483 NPBWR1P48145 328 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 ANKRD55Q3KP44 614 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 Q56UQ5 140 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 TMEM268Q5VZI3 342 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 OR11H7Q8NGC8 314 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 ZNF431Q8TF32 576 aaPredicted RBP9.3□□□□□ -0.92
PRKDC-207ENST00000536483 SPAG8Q99932 426 aaPredicted RBP9.3□□□□□ -0.92
PRKDC-207ENST00000536483 PDCD10Q9BUL8 212 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
PRKDC-207ENST00000536483 IGHV3-21A0A0B4J1V1 117 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 TMEM50AO95807 157 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 HTR2BP41595 481 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 SRPXP78539 464 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms