RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 GAR1Q9NY12 217 aaKnown RBP10.67□□□□□ -0.7
UBE3B-206ENST00000536398 STAB2Q8WWQ8 2551 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 C15orf62A8K5M9 175 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 CEBPZOSA8MTT3 80 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 CHEK1O14757 476 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 TMEM50AO95807 157 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 SULT1A3P0DMM9 295 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 SULT1A4P0DMN0 295 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 NMSQ5H8A3 153 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 TOMM20LQ6UXN7 152 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 RNF2Q99496 336 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
UBE3B-206ENST00000536398 RYR3Q15413 4870 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 A0A1B0GU03 582 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 LINC00854A0A1B0GVQ3 168 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
UBE3B-206ENST00000536398 OPRK1P41145 380 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 HTR2BP41595 481 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 CCR6P51684 374 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 ANKRD55Q3KP44 614 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 LGI3Q8N145 548 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 CITED4Q96RK1 184 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 UBQLN2Q9UHD9 624 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
UBE3B-206ENST00000536398 CORTO00230 105 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 TSPAN4O14817 238 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 ANXA3P12429 323 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 NPBWR1P48145 328 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 PPP1R1AQ13522 171 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 SMCO1Q147U7 214 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 TMEM128Q5BJH2 165 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 LILRB2Q8N423 598 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 SPATA25Q9BR10 227 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 RBKSQ9H477 322 aa10.64□□□□□ -0.71
UBE3B-206ENST00000536398 PUS1Q9Y606 427 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBE3B-206ENST00000536398 STARD9Q9P2P6 4700 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 TRAV14DV4A0A0A6YYC5 116 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 IGHV3-66A0A0C4DH42 116 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 CLN5O75503 358 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 VAMP1P23763 118 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 TNFRSF9Q07011 255 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 TIGITQ495A1 244 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 C2orf83Q53S99 150 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 LAMTOR1Q6IAA8 161 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 SLC24A4Q8NFF2 622 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 OR4X1Q8NH49 305 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 SPAG8Q99932 426 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-206ENST00000536398 SLC25A21Q9BQT8 299 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-206ENST00000536398 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 HSPB7Q9UBY9 170 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 FLVCR2Q9UPI3 526 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 NBEAL2Q6ZNJ1 2754 aa10.63□□□□□ -0.71
UBE3B-206ENST00000536398 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 SFT2D2O95562 160 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 IGKV1-17P01599 117 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 TFPI2P48307 235 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 TRIQKQ629K1 86 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 PRSS54Q6PEW0 395 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 ZNF600Q6ZNG1 722 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 DEDD2Q8WXF8 326 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 ST8SIA2Q92186 375 aa10.62□□□□□ -0.71
UBE3B-206ENST00000536398 PITX3O75364 302 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 NPY1RP25929 384 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 BTCP35070 178 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 RND2P52198 227 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 SRPXP78539 464 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 CENPSQ8N2Z9 138 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 GBGT1Q8N5D6 347 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 OR1S1Q8NH92 325 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 DTD1Q8TEA8 209 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
UBE3B-206ENST00000536398 NDUFB6O95139 128 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 IFNA10P01566 189 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 HOXB5P09067 269 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 INPP1P49441 399 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 RBMS2Q15434 407 aaKnown RBP10.6□□□□□ -0.71
UBE3B-206ENST00000536398 ZNF124Q15973 351 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 MUC7Q8TAX7 377 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 RNASEH2CQ8TDP1 164 aaKnown RBP10.6□□□□□ -0.71
UBE3B-206ENST00000536398 NPIPB3Q92617 1050 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 VSIRQ9H7M9 311 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 NDUFA13Q9P0J0 144 aa10.6□□□□□ -0.71
UBE3B-206ENST00000536398 LOC102724200A0A096LPH7 203 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-206ENST00000536398 DUXBA0A1W2PPF3 345 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 RPS10-NUDT3A0A1W2PQS6 291 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 C3orf84H3BNL1 204 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 DFFBO76075 338 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms