RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 RNASE7Q9H1E1 156 aaKnown RBP17.48■□□□□ 0.39
TRIM3-214ENST00000536344 SELENOKQ9Y6D0 94 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 DSCAML1Q8TD84 2053 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 LYNX1G3V0Z9 82 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 LYNX1P0DP58 116 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 IGLL1P15814 213 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 RPEL1Q2QD12 228 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 Q56UQ5 140 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 OCIAD2Q56VL3 154 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 MRPL54Q6P161 138 aaKnown RBP17.48■□□□□ 0.39
TRIM3-214ENST00000536344 SAP30LQ9HAJ7 183 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 MRPS16Q9Y3D3 137 aaKnown RBP17.48■□□□□ 0.39
TRIM3-214ENST00000536344 V9GYV3 84 aa17.48■□□□□ 0.39
TRIM3-214ENST00000536344 LRRC30A6NM36 301 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 DYNLRB1Q9NP97 96 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 NPIPB11E5RHQ5 1161 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 C15orf65H3BRN8 121 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 S1PR2O95136 353 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 KLHDC1Q8N7A1 406 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 CSMD1Q96PZ7 3565 aa17.47■□□□□ 0.39
TRIM3-214ENST00000536344 BMPR1BO00238 502 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 TMEM136Q6ZRR5 245 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 OR2T8A6NH00 312 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 MGST3O14880 152 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 CFHR2P36980 270 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 SPATA31B1PQ5VZV4 182 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 SPATA12Q7Z6I5 190 aa17.46■□□□□ 0.39
TRIM3-214ENST00000536344 SPINT2O43291 252 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 MMP23AO75900 390 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 GATA4P43694 442 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 MPV17L2Q567V2 206 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 MIC13Q5XKP0 118 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 STUMQ69YW2 141 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 CLEC2AQ6UVW9 174 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 GNB1LQ9BYB4 327 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 ZNRD1Q9P1U0 126 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 CRYBG3Q68DQ2 2970 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 IGHV1-69-2A0A0G2JMI3 117 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 FOXH1O75593 365 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 ZNF134P52741 427 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 BRWD1-AS2P59051 145 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 SMIM15Q7Z3B0 74 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 GAFA1Q96PS6 74 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 CSTL1Q9H114 145 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 MYO18BQ8IUG5 2567 aa17.45■□□□□ 0.38
TRIM3-214ENST00000536344 VPS13CQ709C8 3753 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 TRAV30A0A087WSZ9 112 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 FAM90A26D6RGX4 464 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 C17orf112F2Z3M2 114 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 TMEM11P17152 192 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 UQCRFS1P47985 274 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 KIR3DL3Q8N743 410 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 EAF1Q96JC9 268 aaPredicted RBP17.44■□□□□ 0.38
TRIM3-214ENST00000536344 C17orf98A8MV24 154 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 RNASE6Q93091 150 aaKnown RBP17.44■□□□□ 0.38
TRIM3-214ENST00000536344 BORCS7Q96B45 105 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 TANC2Q9HCD6 1990 aa17.44■□□□□ 0.38
TRIM3-214ENST00000536344 LINC00473A8K010 186 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 CD3EP07766 207 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 CD1BP29016 333 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 RPL39P5Q59GN2 51 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 EBLN2Q6P2I7 272 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 ZNF645Q8N7E2 425 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 ZNF596Q8TC21 504 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 NGBQ9NPG2 151 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 LY6HO94772 140 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 CA1P00915 261 aaPredicted RBP17.43■□□□□ 0.38
TRIM3-214ENST00000536344 RPL19P84098 196 aaKnown RBP17.43■□□□□ 0.38
TRIM3-214ENST00000536344 VWC2Q2TAL6 325 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 MUC15Q8N387 334 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 OR2D3Q8NGH3 330 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 SSMEM1Q8WWF3 244 aa17.43■□□□□ 0.38
TRIM3-214ENST00000536344 C15orf62A8K5M9 175 aa17.42■□□□□ 0.38
TRIM3-214ENST00000536344 USP24Q9UPU5 2620 aa17.42■□□□□ 0.38
TRIM3-214ENST00000536344 OR10J3Q5JRS4 329 aa17.42■□□□□ 0.38
TRIM3-214ENST00000536344 LYPD2Q6UXB3 125 aa17.42■□□□□ 0.38
TRIM3-214ENST00000536344 PRORYQ9H606 182 aa17.42■□□□□ 0.38
TRIM3-214ENST00000536344 SEPSECSQ9HD40 501 aaKnown RBP17.42■□□□□ 0.38
TRIM3-214ENST00000536344 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.42■□□□□ 0.38
TRIM3-214ENST00000536344 HCFC1P51610 2035 aa17.42■□□□□ 0.38
TRIM3-214ENST00000536344 SAA2-SAA4A0A096LPE2 208 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 TAX1BP3O14907 124 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 STAG3L2P0CL84 134 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 STAG3L3P0CL85 134 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 TNFRSF1AP19438 455 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 TNXAQ16473 311 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 OR4A47Q6IF82 309 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 PPP1R35Q8TAP8 253 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 CALYQ9NYX4 217 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 MALRD1Q5VYJ5 2156 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 TMEM238C9JI98 176 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 PROP1O75360 226 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 FCN3O75636 299 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 P0C879 139 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 RIPPLY3P57055 190 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 AMMECR1LQ6DCA0 310 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 C1orf229Q6ZS94 237 aaPredicted RBP17.41■□□□□ 0.38
TRIM3-214ENST00000536344 WDR83OSQ9Y284 106 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 ARHGAP32A7KAX9 2087 aa17.41■□□□□ 0.38
TRIM3-214ENST00000536344 EPG5Q9HCE0 2579 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms