RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 LINC00173Q6ZV60 143 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 SLC25A33Q9BSK2 321 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 FOXA2Q9Y261 457 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-214ENST00000535493 LY96Q9Y6Y9 160 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 FAM90A9PA6NNJ1 464 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 ZNF891A8MT65 544 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-214ENST00000535493 HLA-DQA1P01909 254 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 BLNKQ8WV28 456 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 ITLN1Q8WWA0 313 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 SELENOKQ9Y6D0 94 aa10.91□□□□□ -0.66
HDAC4-214ENST00000535493 TEX50A0A1B0GTY4 177 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 CCL11P51671 97 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 FAM216BQ8N7L0 139 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 NUDT10Q8NFP7 164 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 NUDT11Q96G61 164 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 CHODLQ9H9P2 273 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-214ENST00000535493 CACNA1HO95180 2353 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 FAM181BA6NEQ2 426 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 F2RL2O00254 374 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 REG1AP05451 166 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 RUSC1-AS1Q66K80 236 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 CCL13Q99616 98 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 SLC25A2Q9BXI2 301 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 RNF24Q9Y225 148 aa10.9□□□□□ -0.66
HDAC4-214ENST00000535493 IGHV3-21A0A0B4J1V1 117 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 LNP1A1A4G5 178 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 IZUMO1RA6ND01 250 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 C8orf88P0DMB2 117 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 CEACAM8P31997 349 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-214ENST00000535493 ZNF138P52744 262 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 ZNF841Q6ZN19 808 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 OR8B2Q96RD0 313 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 ZPBPQ9BS86 351 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 ASCL3Q9NQ33 180 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 TNFRSF19Q9NS68 423 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 SAA1P0DJI8 122 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-214ENST00000535493 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 ZNF137PP52743 207 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 MRPL52Q86TS9 123 aaKnown RBP10.89□□□□□ -0.67
HDAC4-214ENST00000535493 FAM167A-AS1Q96KT0 104 aa10.89□□□□□ -0.67
HDAC4-214ENST00000535493 TOX4O94842 621 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 WT1P19544 449 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-214ENST00000535493 SELENOVP59797 346 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 Q71RC1 249 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-214ENST00000535493 ZCCHC24Q8N2G6 241 aaKnown RBP10.88□□□□□ -0.67
HDAC4-214ENST00000535493 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 MRPL36Q9P0J6 103 aaKnown RBP10.88□□□□□ -0.67
HDAC4-214ENST00000535493 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-214ENST00000535493 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 M0R1B8 84 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 RPL19P84098 196 aaKnown RBP10.88□□□□□ -0.67
HDAC4-214ENST00000535493 C1orf210Q8IVY1 113 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 ASCL2Q99929 193 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 BSNQ9UPA5 3926 aa10.88□□□□□ -0.67
HDAC4-214ENST00000535493 KBTBD11-OT1A0A1B0GTJ5 212 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 C21orf140B9A014 251 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 TAS2R45P59539 299 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 PRCDQ00LT1 54 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 DIAPH2-AS1Q14236 149 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 LEMD1Q68G75 181 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 LINC00322Q6ZN03 302 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-214ENST00000535493 NPIPB3Q92617 1050 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 DSCAML1Q8TD84 2053 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 NKX2-8O15522 239 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 CRYABP02511 175 aaKnown RBP10.87□□□□□ -0.67
HDAC4-214ENST00000535493 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
HDAC4-214ENST00000535493 PPP1R35Q8TAP8 253 aa10.87□□□□□ -0.67
HDAC4-214ENST00000535493 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-214ENST00000535493 UPK2O00526 184 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 CGB3P0DN86 165 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 CGB7P0DN87 165 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 CA7P43166 264 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-214ENST00000535493 TBR1Q16650 682 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 MPV17L2Q567V2 206 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 PEAR1Q5VY43 1037 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-214ENST00000535493 PATE2Q6UY27 113 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 KLHDC1Q8N7A1 406 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 CORO2AQ92828 525 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 URB1-AS1Q96HZ7 61 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 FER1L6-AS2Q96M78 137 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 COX11Q9Y6N1 276 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 COL27A1Q8IZC6 1860 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-214ENST00000535493 A0A1W2PRE2 83 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 MOSP00540 346 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 ORM2P19652 201 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 RBX1P62877 108 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms