RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ST8SIA2Q92186 375 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 HEYLQ9NQ87 328 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 C11orf94C9JXX5 98 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 GSTZ1O43708 216 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 CLN5O75503 358 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 RAB3DO95716 219 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 SPP1P10451 314 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 ZNF182P17025 639 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 PI3P19957 117 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 ETV6P41212 452 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 LEMD1Q68G75 181 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 TERB2Q8NHR7 220 aa9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 C11orf68Q9H3H3 251 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-205ENST00000535452 CEBPZOSA8MTT3 80 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 TMEM50AO95807 157 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 CD3DP04234 171 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 SLC25A4P12235 298 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 NUP62P37198 522 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 SPCS3P61009 180 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 SNRPD3P62318 126 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 DHODHQ02127 395 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 SSBP1Q04837 148 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 OR4X1Q8NH49 305 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 SCGB3A2Q96PL1 93 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 VSIRQ9H7M9 311 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 RABL2AQ9UBK7 228 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 RABL2BQ9UNT1 228 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 KCNIP3Q9Y2W7 256 aa9.76□□□□□ -0.85
CLSTN3-205ENST00000535452 NOL3O60936 208 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 IGKV1-39P01597 117 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 IGKV1D-39P04432 117 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 RPL5P46777 297 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 P2RY1P47900 373 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 STEAP1BQ6NZ63 245 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 TMEM229BQ8NBD8 167 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 OR1S2Q8NGQ3 325 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 TP53RKQ96S44 253 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 ABHD1Q96SE0 405 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 MTFP1Q9UDX5 166 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 RYR2Q92736 4967 aa9.75□□□□□ -0.85
CLSTN3-205ENST00000535452 SACSQ9NZJ4 4579 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 FABP1P07148 127 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 ANXA3P12429 323 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 MIFP14174 115 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 DHRS2Q13268 280 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 SURF2Q15527 256 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 ZNF124Q15973 351 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 SP6Q3SY56 376 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 FAM90A2PQ658T7 463 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 OR13C8Q8NGS7 320 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 OR52E5Q8NH55 327 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 OR52I2Q8NH67 350 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 RBPMSQ93062 196 aaKnown RBP9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 PRRT1Q99946 306 aa9.74□□□□□ -0.85
CLSTN3-205ENST00000535452 A0A0B4J293 547 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 GABARAPH6UMI1 98 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 GABARAPO95166 117 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 IGKV1-5P01602 117 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 HNRNPCP07910 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 RNASE2P10153 161 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 UCP1P25874 307 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 IZUMO4Q1ZYL8 232 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 LHFPL1Q86WI0 220 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 MARCH1Q8TCQ1 289 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 ZNF414Q96IQ9 312 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 NAA60Q9H7X0 242 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 ZFAND3Q9H8U3 227 aa9.73□□□□□ -0.85
CLSTN3-205ENST00000535452 IGLL5B9A064 214 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 IFNA10P01566 189 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 OR5AC1P0C628 307 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 AKAIN1P0CW23 69 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 NPY1RP25929 384 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 OR10J1P30954 320 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 S100A7P31151 101 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 IL18Q14116 193 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 ACTL10Q5JWF8 245 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 GPR107Q5VW38 600 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 TMEM268Q5VZI3 342 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 GPR141Q7Z602 305 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 TMEM222Q9H0R3 208 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 SCP2D1Q9UJQ7 156 aa9.72□□□□□ -0.85
CLSTN3-205ENST00000535452 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.85
CLSTN3-205ENST00000535452 A0A1B0GU03 582 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 APOHP02749 345 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 SULT1A3P0DMM9 295 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 SULT1A4P0DMN0 295 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 CRYBB3P26998 211 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 TIGITQ495A1 244 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms