RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 NDUFA13Q9P0J0 144 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 C14orf166Q9Y224 244 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 TNFRSF9Q07011 255 aa11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 PMS2P11Q13670 270 aa11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 TCF24Q7RTU0 167 aa11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 PUS1Q9Y606 427 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLSTN3-204ENST00000535313 TEX13DA0A0J9YY54 714 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 DISC1C4P0D8 188 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 TMEM50AO95807 157 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 TNFSF8P32971 234 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 OPRK1P41145 380 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 FAM90A2PQ658T7 463 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 FAM219AQ8IW50 185 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 TMEM217Q8N7C4 229 aa11.96□□□□□ -0.49
CLSTN3-204ENST00000535313 ALMS1Q8TCU4 4167 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 HYDINQ4G0P3 5121 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 DNASE2O00115 360 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 OR5AC1P0C628 307 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 SPCS3P61009 180 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 RPL11P62913 178 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 SURF2Q15527 256 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 FAAP20Q6NZ36 180 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 VSIRQ9H7M9 311 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 NAA60Q9H7X0 242 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 RABL2AQ9UBK7 228 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 V9GYH0 126 aa11.95□□□□□ -0.5
CLSTN3-204ENST00000535313 A0A0G2JRQ6 117 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 CLN5O75503 358 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 CDS2O95674 445 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 DHODHQ02127 395 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 IL18Q14116 193 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 ZNF124Q15973 351 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 CNPY1Q3B7I2 92 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 OR52E5Q8NH55 327 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 RBPMSQ93062 196 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 DIRAS2Q96HU8 199 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 RTBDNQ9BSG5 229 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 ZFAND3Q9H8U3 227 aa11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 EPPK1P58107 5090 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-204ENST00000535313 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 A0A1B0GU03 582 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 A0A1W2PS18 150 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 DFFBO76075 338 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 APOHP02749 345 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 AKAIN1P0CW23 69 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 NPPCP23582 126 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 HTR2BP41595 481 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 ZNF79Q15937 498 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 Q6ZRM9 215 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 CCDC190Q86UF4 302 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 GLYATL2Q8WU03 294 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 METTL26Q96S19 204 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 PRRT1Q99946 306 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 MS4A6AQ9H2W1 248 aa11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 FNDC4Q9H6D8 234 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-204ENST00000535313 TRAV2A0A0B4J234 112 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 CTDSPLO15194 276 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 BSXQ3C1V8 233 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 SELENOHQ8IZQ5 122 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 LILRB2Q8N423 598 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 OR4C16Q8NGL9 310 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 TMEM230Q96A57 120 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 NARS2Q96I59 477 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 HEYLQ9NQ87 328 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 MRPL36Q9P0J6 103 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 CACNG5Q9UF02 275 aa11.92□□□□□ -0.5
CLSTN3-204ENST00000535313 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 MLANAQ16655 118 aa11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 TMEM268Q5VZI3 342 aa11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 CEMP1Q6PRD7 247 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 GPR146Q96CH1 333 aa11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 RABAC1Q9UI14 185 aa11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 GPR132Q9UNW8 380 aa11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 KLK5Q9Y337 293 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-204ENST00000535313 CRYM-AS1A6NIL9 109 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 CEBPZOSA8MTT3 80 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 DEFB131AP59861 70 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 OR51S1Q8NGJ8 323 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms