RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ST6GALNAC6Q969X2 333 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 A0A1B0GWB2 263 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 CD33P20138 364 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 TIMP3P35625 211 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 PSG8Q9UQ74 426 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF257Q9Y2Q1 563 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 GFI1BQ5VTD9 330 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 NTN3O00634 580 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 SRSF1Q07955 248 aaKnown RBP eCLIP15.09■□□□□ 0.015e-8■■■□□ 18.4
SFSWAP-203ENST00000535236 FOXF2Q12947 444 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 RNASE7Q9H1E1 156 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 DMRT1Q9Y5R6 373 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 PYYP10082 97 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 VMO1Q7Z5L0 202 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 WFDC12Q8WWY7 111 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 CCL20P78556 96 aa15.09■□□□□ 0.01
SFSWAP-203ENST00000535236 CD28P10747 220 aa15.08■□□□□ 0.01
SFSWAP-203ENST00000535236 SEPSECSQ9HD40 501 aaKnown RBP15.08■□□□□ 0.01
SFSWAP-203ENST00000535236 CYSLTR1Q9Y271 337 aa15.08■□□□□ 0.01
SFSWAP-203ENST00000535236 IL18BPO95998 194 aa15.08■□□□□ 0
SFSWAP-203ENST00000535236 FAM19A2Q8N3H0 131 aa15.08■□□□□ 0
SFSWAP-203ENST00000535236 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
SFSWAP-203ENST00000535236 C20orf204Q6ZNR8 217 aa15.08■□□□□ 0
SFSWAP-203ENST00000535236 GTF3AQ92664 365 aaKnown RBP15.08■□□□□ 0
SFSWAP-203ENST00000535236 CCL1P22362 96 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 DUTP33316 252 aaKnown RBP15.07■□□□□ 0
SFSWAP-203ENST00000535236 ERVK11-1P61568 191 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 RNF182Q8N6D2 247 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 GNLYP22749 145 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 FAM166AQ6J272 317 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 PPIFP30405 207 aaKnown RBP15.07■□□□□ 0
SFSWAP-203ENST00000535236 DEFB121Q5J5C9 76 aa15.07■□□□□ 0
SFSWAP-203ENST00000535236 IGHV2-26A0A0B4J1V2 119 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 CYB5R2Q6BCY4 276 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 CARHSP1Q9Y2V2 147 aaKnown RBP15.06■□□□□ 0
SFSWAP-203ENST00000535236 AHCTF1Q8WYP5 2266 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 IGKV1-9A0A0C4DH69 117 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 ST6GALNAC3Q8NDV1 305 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 PRADC1Q9BSG0 188 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 FAM90A9PA6NNJ1 464 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 RPL23P62829 140 aaKnown RBP15.06■□□□□ 0
SFSWAP-203ENST00000535236 TMEM95Q3KNT9 176 aa15.06■□□□□ 0
SFSWAP-203ENST00000535236 SSBP4Q9BWG4 385 aaPredicted RBP15.06■□□□□ 0
SFSWAP-203ENST00000535236 TMEM219Q86XT9 240 aa15.05■□□□□ 0
SFSWAP-203ENST00000535236 PLSCR4Q9NRQ2 329 aa15.05■□□□□ 0
SFSWAP-203ENST00000535236 B4DSR2 109 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 CD55P08174 381 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 MTURNQ8N3F0 131 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 FLVCR1-AS1Q8TAF5 88 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 A0A087WWC5 75 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 A0A1W2PRE2 83 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 TYMSP04818 313 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 IFITM2Q01629 132 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 ORMDL2Q53FV1 153 aa15.05■□□□□ -0
SFSWAP-203ENST00000535236 FGFBP3Q8TAT2 258 aa15.04■□□□□ -0
SFSWAP-203ENST00000535236 PARP14Q460N5 1801 aa15.04■□□□□ -0
SFSWAP-203ENST00000535236 LINC00614P0C842 121 aa15.04■□□□□ -0
SFSWAP-203ENST00000535236 PHLDA1Q8WV24 401 aaPredicted RBP15.04■□□□□ -0
SFSWAP-203ENST00000535236 COQ2Q96H96 371 aa15.04■□□□□ -0
SFSWAP-203ENST00000535236 TRAV12-3A0A0B4J271 114 aa15.04■□□□□ -0
SFSWAP-203ENST00000535236 SLC25A15Q9Y619 301 aa15.04■□□□□ -0
SFSWAP-203ENST00000535236 A0A087WX48 190 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 RNF222A6NCQ9 220 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 MLNRO43193 412 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 HBDP02042 147 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 PPBPP02775 128 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 PAX2Q02962 417 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 FAM169BQ8N8A8 192 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 FBLN5Q9UBX5 448 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 OR5A1Q8NGJ0 315 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 TUBGCP6Q96RT7 1819 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 TMEM86BQ8N661 226 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 LILRA1O75019 489 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 C15orf32Q32M92 178 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 OR10W1Q8NGF6 305 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 MBNL3Q9NUK0 354 aaKnown RBP15.03■□□□□ -0
SFSWAP-203ENST00000535236 RPUSD1Q9UJJ7 312 aaKnown RBP15.03■□□□□ -0
SFSWAP-203ENST00000535236 SSC4DQ8WTU2 575 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 PRDM13Q9H4Q3 707 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 SPCS1Q9Y6A9 102 aa15.03■□□□□ -0
SFSWAP-203ENST00000535236 SNRNP200O75643 2136 aaKnown RBP15.02■□□□□ -0
SFSWAP-203ENST00000535236 PRR32B1ATL7 298 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 KLRD1Q13241 179 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 SELENOKQ9Y6D0 94 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 PIKFYVEQ9Y2I7 2098 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 F2Z2F3 143 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 DPM2O94777 84 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 C1QTNF9P0C862 333 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 IGHV1-8P0DP01 117 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 EVI2AP22794 236 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 TDGF1P3P51864 188 aa15.02■□□□□ -0
SFSWAP-203ENST00000535236 CHTOPQ9Y3Y2 248 aaKnown RBP15.02■□□□□ -0
SFSWAP-203ENST00000535236 TBX6O95947 436 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 TPTE2P1Q5T6R2 138 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 MINOS1Q5TGZ0 78 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 OSTCQ9NRP0 149 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 MINOS1-NBL1R4GNA1 71 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 FAM186AA6NE01 2351 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 EFNB3Q15768 340 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms