RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 NSG2Q9Y328 171 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 S100A7P31151 101 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 SELENOHQ8IZQ5 122 aaKnown RBP7.75□□□□□ -1.17
CSDE1-217ENST00000534699 RNASE11Q8TAA1 199 aaKnown RBP7.75□□□□□ -1.17
CSDE1-217ENST00000534699 RTBDNQ9BSG5 229 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-217ENST00000534699 FAM90A26D6RGX4 464 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 FABP1P07148 127 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 HOXA1P49639 335 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-217ENST00000534699 AP2S1P53680 142 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-217ENST00000534699 IL18Q14116 193 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SPCS2Q15005 226 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SAMD13Q5VXD3 122 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 C19orf35Q6ZS72 473 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 MARCH1Q8TCQ1 289 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SLC25A21Q9BQT8 299 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-217ENST00000534699 RHPN1-AS1Q9BWJ2 59 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 A0A0B4J2A0 478 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SPRY2O43597 315 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SULT1A3P0DMM9 295 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SULT1A4P0DMN0 295 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 MORN3Q6PF18 240 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-217ENST00000534699 LRTM2Q8N967 370 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 GLYATL2Q8WU03 294 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 CACNG8Q8WXS5 425 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 RNF183Q96D59 192 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 SHPKQ9UHJ6 478 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 U3KQ87 197 aa7.74□□□□□ -1.17
CSDE1-217ENST00000534699 A0A1B0GU03 582 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 HELTA6NFD8 242 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 CFDP00746 253 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-217ENST00000534699 CRYBB3P26998 211 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 PPP5CP53041 499 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 TCTAP57738 103 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 SCGB2B2Q4G0G5 96 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 LGI3Q8N145 548 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 OR4C16Q8NGL9 310 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 METTL26Q96S19 204 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 OVOL2Q9BRP0 275 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 SLIRPQ9GZT3 109 aaKnown RBP7.73□□□□□ -1.17
CSDE1-217ENST00000534699 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 DBX1A6NMT0 343 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 CTDSP2O14595 271 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 NPPCP23582 126 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 GPX4P36969 197 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-217ENST00000534699 NMSQ5H8A3 153 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 ZNF414Q96IQ9 312 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 U3KQE9 123 aa7.73□□□□□ -1.17
CSDE1-217ENST00000534699 NUPR2A6NF83 97 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 NAP1L6A6NFF2 107 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 FABP12A6NFH5 140 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 MED6O75586 246 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 SCAF4O95104 1147 aaKnown RBP7.72□□□□□ -1.17
CSDE1-217ENST00000534699 TMEM187Q14656 261 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 TOMM20LQ6UXN7 152 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 C20orf24Q9BUV8 137 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 S4R3C0 116 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 A6NHS1 94 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 OR5AC1P0C628 307 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 RPP30P78346 268 aaKnown RBP7.72□□□□□ -1.17
CSDE1-217ENST00000534699 SMCO1Q147U7 214 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 MCFD2Q8NI22 146 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 Q8WTZ3 238 aa7.72□□□□□ -1.17
CSDE1-217ENST00000534699 C11orf68Q9H3H3 251 aaKnown RBP7.72□□□□□ -1.17
CSDE1-217ENST00000534699 S100A5P33763 92 aa7.71□□□□□ -1.17
CSDE1-217ENST00000534699 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.17
CSDE1-217ENST00000534699 OR8G2PQ6IF36 304 aa7.71□□□□□ -1.17
CSDE1-217ENST00000534699 GPR146Q96CH1 333 aa7.71□□□□□ -1.17
CSDE1-217ENST00000534699 MAP6D1Q9H9H5 199 aa7.71□□□□□ -1.17
CSDE1-217ENST00000534699 HSPB7Q9UBY9 170 aa7.71□□□□□ -1.17
CSDE1-217ENST00000534699 MPTX1A8MV57 137 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 H3BMQ9 156 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 SPP1P10451 314 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 TNFSF8P32971 234 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 TCF24Q7RTU0 167 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 UBAC2Q8NBM4 344 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 CLUHP3Q96NS8 147 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 CIB3Q96Q77 187 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-217ENST00000534699 C7orf50Q9BRJ6 194 aaKnown RBP7.71□□□□□ -1.18
CSDE1-217ENST00000534699 MFFQ9GZY8 342 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 HEYLQ9NQ87 328 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-217ENST00000534699 FBXL17Q9UF56 701 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 SLC45A2Q9UMX9 530 aa7.71□□□□□ -1.18
CSDE1-217ENST00000534699 HNRNPCP07910 306 aaKnown RBP eCLIP7.7□□□□□ -1.183e-6■■■□□ 18.5
CSDE1-217ENST00000534699 AKR1C4P17516 323 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 ETV6P41212 452 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 TMEM128Q5BJH2 165 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 TMEM268Q5VZI3 342 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 OR4D10Q8NGI6 311 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 CSTL1Q9H114 145 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 KLK5Q9Y337 293 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-217ENST00000534699 TOMM40O96008 361 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 NPY1RP25929 384 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 OPRK1P41145 380 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 SPATA31B1PQ5VZV4 182 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 RNF24Q9Y225 148 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 TMED3Q9Y3Q3 217 aa7.7□□□□□ -1.18
CSDE1-217ENST00000534699 EDN2P20800 178 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 KLF9Q13886 244 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms