RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 SDHCQ99643 169 aaPredicted RBP11.98□□□□□ -0.49
PAX6-230ENST00000534390 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
PAX6-230ENST00000534390 RPS10-NUDT3A0A1W2PQS6 291 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 SFT2D2O95562 160 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 IFNA10P01566 189 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 NPY1RP25929 384 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 FCGR2BP31994 310 aaPredicted RBP11.97□□□□□ -0.49
PAX6-230ENST00000534390 TNFRSF9Q07011 255 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 SLC16A13Q7RTY0 426 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 DTD1Q8TEA8 209 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 WFDC10AQ9H1F0 79 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 RBKSQ9H477 322 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 FLVCR2Q9UPI3 526 aa11.97□□□□□ -0.49
PAX6-230ENST00000534390 COL7A1Q02388 2944 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 C15orf62A8K5M9 175 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 NDUFB6O95139 128 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 HOXB5P09067 269 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 C8orf88P0DMB2 117 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 MLANAQ16655 118 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 DEFB125Q8N687 156 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.49
PAX6-230ENST00000534390 ZMAT4Q9H898 229 aa11.96□□□□□ -0.49
PAX6-230ENST00000534390 A0A1B0GU03 582 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 DUXBA0A1W2PPF3 345 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 C2orf83Q53S99 150 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 LAMTOR1Q6IAA8 161 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 C7orf50Q9BRJ6 194 aaKnown RBP11.95□□□□□ -0.5
PAX6-230ENST00000534390 GINS3Q9BRX5 216 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 SRD5A3Q9H8P0 318 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 MRPL36Q9P0J6 103 aaKnown RBP11.95□□□□□ -0.5
PAX6-230ENST00000534390 HSPB7Q9UBY9 170 aa11.95□□□□□ -0.5
PAX6-230ENST00000534390 PAIP2BQ9ULR5 123 aaKnown RBP11.95□□□□□ -0.5
PAX6-230ENST00000534390 PUS1Q9Y606 427 aaKnown RBP eCLIP11.95□□□□□ -0.5
PAX6-230ENST00000534390 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 K7EMT4 169 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 CLN5O75503 358 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 TMEM50AO95807 157 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 IAPPP10997 89 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
PAX6-230ENST00000534390 RND2P52198 227 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 ZNF600Q6ZNG1 722 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 RCHY1Q96PM5 261 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 C19orf73Q9NVV2 129 aa11.94□□□□□ -0.5
PAX6-230ENST00000534390 IGKV3-7A0A075B6H7 116 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 TRAV14DV4A0A0A6YYC5 116 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 TRAV25A0A0B4J276 109 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 C9orf170A2RU37 121 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 IFNA4P05014 189 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 BTCP35070 178 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 UBE2MP61081 183 aaKnown RBP11.93□□□□□ -0.5
PAX6-230ENST00000534390 CNPY1Q3B7I2 92 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 TIGITQ495A1 244 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 OR4X1Q8NH49 305 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 COQ8AQ8NI60 647 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
PAX6-230ENST00000534390 ACY3Q96HD9 319 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 WWC2-AS2Q96NR7 200 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 SMPXQ9UHP9 88 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 DNAH9Q9NYC9 4486 aa11.93□□□□□ -0.5
PAX6-230ENST00000534390 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 A8MZ25 164 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 LYRM1O43325 122 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 SLC25A4P12235 298 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 BMI1P35226 326 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 TFPI2P48307 235 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 GGNBP1Q5YKI7 109 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 ETFRF1Q6IPR1 90 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 TMEM170AQ8WVE7 144 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 OR10C1Q96KK4 312 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 RNF2Q99496 336 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
PAX6-230ENST00000534390 MAGT1Q9H0U3 335 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 U3KQ87 197 aa11.92□□□□□ -0.5
PAX6-230ENST00000534390 CHEK1O14757 476 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 ADAP1O75689 374 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 OR4E1P0C645 316 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 OR10J1P30954 320 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
PAX6-230ENST00000534390 DHRS2Q13268 280 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 HAGHQ16775 308 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 PRSS54Q6PEW0 395 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 ZNF414Q96IQ9 312 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 C20orf85Q9H1P6 137 aa11.91□□□□□ -0.5
PAX6-230ENST00000534390 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms