RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 TMEM50AO95807 157 aa14.33□□□□□ -0.11
PHRF1-206ENST00000534320 MOSP00540 346 aa14.33□□□□□ -0.11
PHRF1-206ENST00000534320 EGR1P18146 543 aa14.33□□□□□ -0.11
PHRF1-206ENST00000534320 PRELID3AQ96N28 172 aa14.33□□□□□ -0.11
PHRF1-206ENST00000534320 SNAI2O43623 268 aa14.33□□□□□ -0.12
PHRF1-206ENST00000534320 PSPNO60542 156 aa14.33□□□□□ -0.12
PHRF1-206ENST00000534320 PF4V1P10720 104 aa14.33□□□□□ -0.12
PHRF1-206ENST00000534320 SYT8Q8NBV8 401 aa14.33□□□□□ -0.12
PHRF1-206ENST00000534320 EAF1Q96JC9 268 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-206ENST00000534320 ZNF581Q9P0T4 197 aa14.33□□□□□ -0.12
PHRF1-206ENST00000534320 FGF16O43320 207 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 TBR1Q16650 682 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 MEIG1Q5JSS6 88 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 TMEM170AQ8WVE7 144 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 METTL26Q96S19 204 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 DUTP33316 252 aaKnown RBP14.32□□□□□ -0.12
PHRF1-206ENST00000534320 ATP5LO75964 103 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 NRN1Q9NPD7 142 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 ID1P41134 155 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 GAGE2BQ13066 116 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 GAGE2EQ4V326 116 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 GAGE2DQ9UEU5 116 aa14.32□□□□□ -0.12
PHRF1-206ENST00000534320 MBD3L4A6NDZ8 208 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-206ENST00000534320 MBD3L3A6NE82 208 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-206ENST00000534320 MBD3L5A6NJ08 208 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-206ENST00000534320 SAA1P0DJI8 122 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-206ENST00000534320 CLDND2Q8NHS1 167 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 MBD3L2Q8NHZ7 208 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-206ENST00000534320 MOB4Q9Y3A3 225 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 MPDZO75970 2070 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 TRAV9-2A0A087WT02 112 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 HTN1P15515 57 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 ANOS1P23352 680 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 ZFAND6Q6FIF0 208 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 CCL19Q99731 98 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 H3BTX0 84 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 ESPL1Q14674 2120 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 ASCL4Q6XD76 172 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 WFDC1Q9HC57 220 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 UPK2O00526 184 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 FOXA3P55318 350 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-206ENST00000534320 LINC00305Q7Z4B0 112 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 WFDC3Q8IUB2 231 aa14.31□□□□□ -0.12
PHRF1-206ENST00000534320 C15orf61A6NNL5 157 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 CENPWQ5EE01 88 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 KIAA1671Q9BY89 1806 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 SEC11AP67812 179 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 Q6ZS92 163 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 SDF2L1Q9HCN8 221 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 TM4SF20Q53R12 229 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 DLX6P56179 175 aa14.3□□□□□ -0.12
PHRF1-206ENST00000534320 ROS1P08922 2347 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 PGPEP1LA6NFU8 196 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 APOMO95445 188 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 IGKV1D-33P01593 117 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 IGKV1-33P01594 117 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 CD55P08174 381 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 PLA2G2CQ5R387 149 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 C5orf24Q7Z6I8 188 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 CACNG8Q8WXS5 425 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 KIR2DL4Q99706 377 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 IMMP2LQ96T52 175 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 C2orf88Q9BSF0 95 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 KLK15Q9H2R5 256 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 TRBV6-6A0A0A6YYG2 114 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BKO60814 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 PPP1R17O96001 155 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 CGAP01215 116 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BJP06899 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BOP23527 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BBP33778 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BDP58876 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BCP62807 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 SRSF3P84103 164 aaKnown RBP14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST2H2BEQ16778 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.29□□□□□ -0.12
PHRF1-206ENST00000534320 ORAOV1Q8WV07 137 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BHQ93079 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BNQ99877 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 HIST1H2BMQ99879 126 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 CACNA1GO43497 2377 aa14.29□□□□□ -0.12
PHRF1-206ENST00000534320 SERF1AO75920 110 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 LY6EQ16553 131 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 Q6P435 159 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 CD177Q8N6Q3 437 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 OR9G9P0C7N8 305 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 SELLP14151 372 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 C16orf92Q96LL3 132 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 GEMIN7Q9H840 131 aaKnown RBP14.28□□□□□ -0.12
PHRF1-206ENST00000534320 LTBP2Q14767 1821 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 IGHV3OR16-10A0A075B7F0 116 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 TMEM133Q9H2Q1 129 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 CYTL1Q9NRR1 136 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 PHLDA3Q9Y5J5 127 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 ZNF407Q9C0G0 2248 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 APOHP02749 345 aaPredicted RBP14.28□□□□□ -0.12
PHRF1-206ENST00000534320 TFPI2P48307 235 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 RNASEH2CQ8TDP1 164 aaKnown RBP14.28□□□□□ -0.12
PHRF1-206ENST00000534320 A0A1W2PS18 150 aa14.28□□□□□ -0.12
PHRF1-206ENST00000534320 LYNX1G3V0Z9 82 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms