RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 C2orf83Q53S99 150 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 ZNF600Q6ZNG1 722 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 CACNG8Q8WXS5 425 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 WDR89Q96FK6 387 aaPredicted RBP11.63□□□□□ -0.55
UBXN1-217ENST00000534176 C20orf24Q9BUV8 137 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 U3KQ87 197 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 TRAV14DV4A0A0A6YYC5 116 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 IGHV3-21A0A0B4J1V1 117 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 A0A1B0GU03 582 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 CENPXA8MT69 81 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 CEBPZOSA8MTT3 80 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 YIF1AO95070 293 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 SLC25A6P12236 298 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 ZNF79Q15937 498 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 NMSQ5H8A3 153 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 TRIQKQ629K1 86 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 OR4X1Q8NH49 305 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
UBXN1-217ENST00000534176 DNAH9Q9NYC9 4486 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 IGHV7-4-1A0A0J9YVY3 117 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 CLN5O75503 358 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 CD7P09564 240 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 HAGHQ16775 308 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 LINC00322Q6ZN03 302 aaPredicted RBP11.61□□□□□ -0.55
UBXN1-217ENST00000534176 Q6ZRM9 215 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 TMEM116Q8NCL8 245 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 SLC24A4Q8NFF2 622 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 GPR146Q96CH1 333 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 NARS2Q96I59 477 aaKnown RBP11.61□□□□□ -0.55
UBXN1-217ENST00000534176 C7orf50Q9BRJ6 194 aaKnown RBP11.61□□□□□ -0.55
UBXN1-217ENST00000534176 SMPXQ9UHP9 88 aa11.61□□□□□ -0.55
UBXN1-217ENST00000534176 A0A1W2PS18 150 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 SCAF4O95104 1147 aaKnown RBP11.6□□□□□ -0.55
UBXN1-217ENST00000534176 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
UBXN1-217ENST00000534176 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 TMED4Q7Z7H5 227 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 CENPSQ8N2Z9 138 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 CITED4Q96RK1 184 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 SRRQ9GZT4 340 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 SRD5A3Q9H8P0 318 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 TMED3Q9Y3Q3 217 aa11.6□□□□□ -0.55
UBXN1-217ENST00000534176 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
UBXN1-217ENST00000534176 TMEM50AO95807 157 aa11.59□□□□□ -0.55
UBXN1-217ENST00000534176 NPY1RP25929 384 aa11.59□□□□□ -0.55
UBXN1-217ENST00000534176 LINC00299Q6ZSB3 139 aa11.59□□□□□ -0.55
UBXN1-217ENST00000534176 RHPN1-AS1Q9BWJ2 59 aa11.59□□□□□ -0.55
UBXN1-217ENST00000534176 STAB2Q8WWQ8 2551 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 MED6O75586 246 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 VAMP1P23763 118 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 EIF2B2P49770 351 aaKnown RBP11.58□□□□□ -0.56
UBXN1-217ENST00000534176 RPP30P78346 268 aaKnown RBP11.58□□□□□ -0.56
UBXN1-217ENST00000534176 DEFB125Q8N687 156 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 OR1S2Q8NGQ3 325 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 OR1S1Q8NH92 325 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 IL17DQ8TAD2 202 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 DTD1Q8TEA8 209 aa11.58□□□□□ -0.56
UBXN1-217ENST00000534176 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
UBXN1-217ENST00000534176 LOC102724200A0A096LPH7 203 aaPredicted RBP11.57□□□□□ -0.56
UBXN1-217ENST00000534176 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 CHEK1O14757 476 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 IFNA10P01566 189 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 EDN2P20800 178 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 NPPCP23582 126 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 APOC4P55056 127 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 LYZL2Q7Z4W2 148 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 METTL26Q96S19 204 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 PFDN2Q9UHV9 154 aa11.57□□□□□ -0.56
UBXN1-217ENST00000534176 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBXN1-217ENST00000534176 UBE2CO00762 179 aa11.56□□□□□ -0.56
UBXN1-217ENST00000534176 SFT2D2O95562 160 aa11.56□□□□□ -0.56
UBXN1-217ENST00000534176 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
UBXN1-217ENST00000534176 Q8WTZ3 238 aa11.56□□□□□ -0.56
UBXN1-217ENST00000534176 FNDC4Q9H6D8 234 aaPredicted RBP11.56□□□□□ -0.56
UBXN1-217ENST00000534176 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
UBXN1-217ENST00000534176 KIR2DL5BA0A0G2JN68 375 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 KIR2DL5BA0A0G2JPC4 375 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 NDUFB6O95139 128 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 FABP1P07148 127 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 GPX4P36969 197 aaPredicted RBP11.55□□□□□ -0.56
UBXN1-217ENST00000534176 NUP62P37198 522 aaPredicted RBP11.55□□□□□ -0.56
UBXN1-217ENST00000534176 RAB11AP62491 216 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 KIR2DL5AQ8N109 375 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 KIR2DL5BQ8NHK3 375 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 COQ8AQ8NI60 647 aa11.55□□□□□ -0.56
UBXN1-217ENST00000534176 RNF2Q99496 336 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms