RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OPRK1P41145 380 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 HTR2BP41595 481 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 TMEM187Q14656 261 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 AARDQ4LEZ3 155 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 IL22RA2Q969J5 263 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 RNF2Q99496 336 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 UBQLN2Q9UHD9 624 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 IGHV3-49A0A0A0MS15 119 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 CEBPZOSA8MTT3 80 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 SCGB2A1O75556 95 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 ANXA3P12429 323 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 BMI1P35226 326 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 MLANAQ16655 118 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 ZNF600Q6ZNG1 722 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 FAM110AQ9BQ89 295 aa12.85□□□□□ -0.35
PHRF1-204ENST00000532550 CLN5O75503 358 aa12.84□□□□□ -0.35
PHRF1-204ENST00000532550 SULT1A3P0DMM9 295 aa12.84□□□□□ -0.35
PHRF1-204ENST00000532550 SULT1A4P0DMN0 295 aa12.84□□□□□ -0.35
PHRF1-204ENST00000532550 BSXQ3C1V8 233 aa12.84□□□□□ -0.35
PHRF1-204ENST00000532550 OR4X1Q8NH49 305 aa12.84□□□□□ -0.35
PHRF1-204ENST00000532550 PUS1Q9Y606 427 aaKnown RBP eCLIP12.84□□□□□ -0.35
PHRF1-204ENST00000532550 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 RPS10-NUDT3A0A1W2PQS6 291 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 CD5P06127 495 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 CMC4P56277 68 aaPredicted RBP12.83□□□□□ -0.36
PHRF1-204ENST00000532550 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.36
PHRF1-204ENST00000532550 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 FNDC4Q9H6D8 234 aaPredicted RBP12.83□□□□□ -0.36
PHRF1-204ENST00000532550 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 V9GYH0 126 aa12.83□□□□□ -0.36
PHRF1-204ENST00000532550 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 TRAV30A0A087WSZ9 112 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 A0A0B4J2A0 478 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 PIGBOS1A0A0B4J2F0 54 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 ZNF701M0R085 212 aaPredicted RBP12.82□□□□□ -0.36
PHRF1-204ENST00000532550 CCR6P51684 374 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 SUPT4H1P63272 117 aaKnown RBP12.82□□□□□ -0.36
PHRF1-204ENST00000532550 PAFAH1B2P68402 229 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 SRPXP78539 464 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 C2orf83Q53S99 150 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 NOXA1Q86UR1 476 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 LGI3Q8N145 548 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 SHPKQ9UHJ6 478 aa12.82□□□□□ -0.36
PHRF1-204ENST00000532550 NXPH3O95157 252 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 NPPCP23582 126 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 TFPI2P48307 235 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 APOC4P55056 127 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 TMEM128Q5BJH2 165 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 SPANXN2Q5MJ10 180 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 TCF24Q7RTU0 167 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 SLC24A4Q8NFF2 622 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 IL17DQ8TAD2 202 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 RNASEH2CQ8TDP1 164 aaKnown RBP12.81□□□□□ -0.36
PHRF1-204ENST00000532550 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 TRIM63Q969Q1 353 aa12.81□□□□□ -0.36
PHRF1-204ENST00000532550 RBM38Q9H0Z9 239 aaKnown RBP12.81□□□□□ -0.36
PHRF1-204ENST00000532550 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
PHRF1-204ENST00000532550 A0A1B0GU03 582 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 A0A1W2PS18 150 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 SLC25A4P12235 298 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 ZNF79Q15937 498 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 FAM90A2PQ658T7 463 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 ETFRF1Q6IPR1 90 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 ST8SIA2Q92186 375 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
PHRF1-204ENST00000532550 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 VSIRQ9H7M9 311 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
PHRF1-204ENST00000532550 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 DNASE2O00115 360 aaPredicted RBP12.79□□□□□ -0.36
PHRF1-204ENST00000532550 IFNA10P01566 189 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 APOHP02749 345 aaPredicted RBP12.79□□□□□ -0.36
PHRF1-204ENST00000532550 NPY1RP25929 384 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
PHRF1-204ENST00000532550 TNFRSF9Q07011 255 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 TIGITQ495A1 244 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 STPG3Q8N7X2 389 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 METTL26Q96S19 204 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 U3KQ87 197 aa12.79□□□□□ -0.36
PHRF1-204ENST00000532550 UBE2CO00762 179 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 DFFBO76075 338 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 INPP1P49441 399 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms