RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 A0A1W2PPB8 328 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 KIR3DP1A8MWS1 328 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 CD14P08571 375 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 SCGB1C2P0DMR2 95 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 ATP6V0CP27449 155 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 TGFBR1P36897 503 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 LSM3P62310 102 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 MEF2BQ02080 365 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 LYRM7Q5U5X0 104 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 FKBP1CQ5VVH2 108 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 PCSK4Q6UW60 755 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 SMIM5Q71RC9 77 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 TMEM183AQ8IXX5 376 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 SCGB1C1Q8TD33 95 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 YPEL4Q96NS1 127 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 NRTNQ99748 197 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 MCTS1Q9ULC4 181 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF706Q9Y5V0 76 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 CITO14578 2027 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 SSC5DA1L4H1 1573 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 BCL2L11O43521 198 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BKO60814 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HLA-DQB1P01920 261 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BJP06899 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 SMIM10L2AP0DMW4 78 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 SMIM10L2BP0DMW5 78 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 TMEM183BQ1AE95 376 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 GLIPR1L1Q6UWM5 242 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HEPN1Q6WQI6 88 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 MKXQ8IYA7 352 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 TVP23BQ9NYZ1 205 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 KLK13Q9UKR3 277 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 FSTL3O95633 263 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 CSRP1P21291 193 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 RPS10P46783 165 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 LINC00313P59037 77 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 TAS2R20P59543 309 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 Q5XG85 94 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 LAIR2Q6ISS4 152 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 OR11G2Q8NGC1 345 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 TMEM106AQ96A25 262 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 C18orf15Q96N68 181 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 RPS10P5Q9NQ39 176 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 PCTPQ9UKL6 214 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 V9GYH0 126 aa3.92□□□□□ -1.78
ECHDC1-222ENST00000531967 B4DEV8 164 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 PEX7O00628 323 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 DEDDO75618 318 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 NFYAP23511 347 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 FOXA1P55317 472 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 PDGFRLQ15198 375 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF660Q6AZW8 331 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 OR2T2Q6IF00 324 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 UNQ5815/PRO19632Q6UWF5 114 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 MOB1BQ7L9L4 216 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 MARCH3Q86UD3 253 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 PLPP5Q8NEB5 264 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF555Q8NEP9 628 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 OR52R1Q8NGF1 315 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 SLAMF6Q96DU3 332 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 GNPNAT1Q96EK6 184 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 OR2A5Q96R48 311 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF471Q9BX82 626 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 ATG5Q9H1Y0 275 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 C11orf68Q9H3H3 251 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 TPRKBQ9Y3C4 175 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 GBF1Q92538 1859 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 TRDV1A0A1B0GX56 115 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 MCRIP1C9JLW8 97 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 NDUFC2-KCTD14E9PQ53 114 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 PLA2G10O15496 165 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 CDKN2AP42771 156 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 HES3Q5TGS1 186 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 GFI1BQ5VTD9 330 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 FAM53AQ6NSI3 398 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 EBLN2Q6P2I7 272 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 MDP1Q86V88 176 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 LHFPL1Q86WI0 220 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF695Q8IW36 515 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 OR4C16Q8NGL9 310 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 OR2T35Q8NGX2 323 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 PP6455Q8WZ26 134 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 TSLPQ969D9 159 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 GABARAPL1Q9H0R8 117 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 PROCRQ9UNN8 238 aa3.91□□□□□ -1.78
ECHDC1-222ENST00000531967 ANKRD36A6QL64 1941 aa3.9□□□□□ -1.78
ECHDC1-222ENST00000531967 HMSDA8MTL9 139 aa3.9□□□□□ -1.78
ECHDC1-222ENST00000531967 FXYD1O00168 92 aa3.9□□□□□ -1.78
ECHDC1-222ENST00000531967 LYRM1O43325 122 aa3.9□□□□□ -1.78
ECHDC1-222ENST00000531967 DPM2O94777 84 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms