RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 LRRN3E7EW58 273 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 INMT-MINDY4F8WBC2 141 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 M0QZ92 97 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 SLC16A4O15374 487 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 SULT1B1O43704 296 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 LYZL6O75951 148 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 OR5G3P0C626 314 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 BLVRAP53004 296 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 AP2S1P53680 142 aaPredicted RBP0.09□□□□□ -2.4
NUP98-218ENST00000530516 SKP1P63208 163 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 TMED1Q13445 227 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 C1orf137Q5JT78 98 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 CLVS1Q8IUQ0 354 aaPredicted RBP0.09□□□□□ -2.4
NUP98-218ENST00000530516 HIST3H2BBQ8N257 126 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 TMEM156Q8N614 296 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 OR5A1Q8NGJ0 315 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 OR10J5Q8NHC4 309 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 RAB8BQ92930 207 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 IMP4Q96G21 291 aaKnown RBP0.09□□□□□ -2.4
NUP98-218ENST00000530516 PRTFDC1Q9NRG1 225 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 USE1Q9NZ43 259 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 LSM5Q9Y4Y9 91 aaKnown RBP0.09□□□□□ -2.4
NUP98-218ENST00000530516 HECW1Q76N89 1606 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 TNCP24821 2201 aa0.09□□□□□ -2.4
NUP98-218ENST00000530516 MAP3K5Q99683 1374 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 EVPLLA8MZ36 301 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 ZNF736B4DX44 427 aaPredicted RBP0.08□□□□□ -2.4
NUP98-218ENST00000530516 H0Y980 276 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 EFNA4P52798 201 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 CNBPP62633 177 aaKnown RBP0.08□□□□□ -2.4
NUP98-218ENST00000530516 HBA1P69905 142 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 PMAIP1Q13794 54 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 CD200R1LQ6Q8B3 271 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 BPIFA4PQ86YQ2 179 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 C3orf56Q8N813 242 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 TEX47Q8TBZ9 253 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 DNAJC9Q8WXX5 260 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 DRC3Q9H069 523 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 OR51I1Q9H343 314 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 NIT2Q9NQR4 276 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 XPNPEP1Q9NQW7 623 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 CDC42SE1Q9NRR8 79 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 SLC39A9Q9NUM3 307 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 FBXL12Q9NXK8 326 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 ERGIC3Q9Y282 383 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 SLC35A3Q9Y2D2 325 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 ASH1LQ9NR48 2969 aaKnown RBP0.08□□□□□ -2.4
NUP98-218ENST00000530516 EVC2Q86UK5 1308 aa0.08□□□□□ -2.4
NUP98-218ENST00000530516 NUP155O75694 1391 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 ARHGEF28Q8N1W1 1705 aaKnown RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 MED1Q15648 1581 aaPredicted RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 ZGRF1Q86YA3 2104 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 SCN8AQ9UQD0 1980 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 PQLC2LA1A4F0 135 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 DPRXA6NFQ7 191 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 M0QX08 132 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 PSMD12O00232 456 aaPredicted RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 FAAHO00519 579 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 DCTN3O75935 186 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 HLA-DRB1P01911 266 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 MGST1P10620 155 aaKnown RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 ZNF25P17030 456 aaPredicted RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 RPS12P25398 132 aaKnown RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 MAGEA2P43356 314 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 PSG9Q00887 426 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 RNASE10Q5GAN6 216 aaKnown RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 LPCAT4Q643R3 524 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 SFXN4Q6P4A7 337 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 TEX261Q6UWH6 196 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 FAM151BQ6UXP7 276 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 GKN2Q86XP6 184 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 PLPP5Q8NEB5 264 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 H1FXQ92522 213 aaKnown RBP0.07□□□□□ -2.4
NUP98-218ENST00000530516 TOMM6Q96B49 74 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 GPR146Q96CH1 333 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 OR52E6Q96RD3 313 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 PRRT1Q99946 306 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 NIPSNAP1Q9BPW8 284 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 PLAC8Q9NZF1 115 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 TP73-AS1Q9UF72 201 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 U3KQ87 197 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 SNAPC4Q5SXM2 1469 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 NEO1Q92859 1461 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 MYO3BQ8WXR4 1341 aa0.07□□□□□ -2.4
NUP98-218ENST00000530516 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
NUP98-218ENST00000530516 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 KDM6AO15550 1401 aaPredicted RBP0.06□□□□□ -2.4
NUP98-218ENST00000530516 TNS3Q68CZ2 1445 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 TRAV9-1A0A075B6T8 112 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 EXOC1LA0A1B0GW35 172 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 CCDC160A6NGH7 325 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 EEF1E1-BLOC1S5C9J1V9 151 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 DEXIO95424 95 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 ISG15P05161 165 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 CD79AP11912 226 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 S100A4P26447 101 aaKnown RBP0.06□□□□□ -2.4
NUP98-218ENST00000530516 CDC42P60953 191 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 PSME3P61289 254 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 SNRPD2P62316 118 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms