RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 KNCNA6PVL3 124 aa10.78□□□□□ -0.68
CAPN1-219ENST00000530495 C4BPBP20851 252 aa10.78□□□□□ -0.68
CAPN1-219ENST00000530495 P2RY1P47900 373 aa10.78□□□□□ -0.68
CAPN1-219ENST00000530495 STXBP6Q8NFX7 210 aa10.78□□□□□ -0.68
CAPN1-219ENST00000530495 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
CAPN1-219ENST00000530495 METTL26Q96S19 204 aa10.78□□□□□ -0.68
CAPN1-219ENST00000530495 CLN5O75503 358 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 IGKV1-5P01602 117 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 ZNF688P0C7X2 276 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 P0C879 139 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 RNASE2P10153 161 aaKnown RBP10.77□□□□□ -0.69
CAPN1-219ENST00000530495 PPP5CP53041 499 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 MLANAQ16655 118 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 ACTL10Q5JWF8 245 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 SLC35G3Q8N808 338 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 OR4X1Q8NH49 305 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 FNDC4Q9H6D8 234 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-219ENST00000530495 SCPEP1Q9HB40 452 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 MRPL36Q9P0J6 103 aaKnown RBP10.77□□□□□ -0.69
CAPN1-219ENST00000530495 TBC1D24Q9ULP9 559 aa10.77□□□□□ -0.69
CAPN1-219ENST00000530495 IFNA17P01571 189 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 ETV6P41212 452 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 RPL5P46777 297 aaKnown RBP10.76□□□□□ -0.69
CAPN1-219ENST00000530495 RND3P61587 244 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 C12orf74Q32Q52 190 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 KCTD21Q4G0X4 260 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 POM121L12Q8N7R1 296 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 TMEM230Q96A57 120 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 RAB40CQ96S21 281 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 CLEC5AQ9NY25 188 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 U3KQE9 123 aa10.76□□□□□ -0.69
CAPN1-219ENST00000530495 TRAV30A0A087WSZ9 112 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 SMIM31A0A1B0GVY4 71 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 AMBPP02760 352 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 RCVRNP35243 200 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 ZNF486Q96H40 463 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-219ENST00000530495 NARS2Q96I59 477 aaKnown RBP10.75□□□□□ -0.69
CAPN1-219ENST00000530495 TP53RKQ96S44 253 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 PDCD10Q9BUL8 212 aa10.75□□□□□ -0.69
CAPN1-219ENST00000530495 SCGB2A1O75556 95 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 ATG12O94817 140 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 ATP6V1G2O95670 118 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 APOA1P02647 267 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 P0DMU3 169 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 FAM231AP0DMU4 169 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 FAM231CP0DMU5 169 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 OPRK1P41145 380 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 EIF2B2P49770 351 aaKnown RBP10.74□□□□□ -0.69
CAPN1-219ENST00000530495 BSXQ3C1V8 233 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
CAPN1-219ENST00000530495 C3orf85A0A1B0GTC6 90 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 HELTA6NFD8 242 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 PRSS29PA6NIE9 313 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 RTL8CO15255 209 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 PGAM2P15259 253 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 PI3P19957 117 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 AKR1C2P52895 323 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 AP2S1P53680 142 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-219ENST00000530495 PIGPP57054 158 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 LSM3P62310 102 aaKnown RBP10.73□□□□□ -0.69
CAPN1-219ENST00000530495 DHRS2Q13268 280 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 TIGITQ495A1 244 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 C16orf54Q6UWD8 224 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 ZNF767PQ75MW2 155 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 SNX29P2Q8IUI4 249 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 YIPF6Q96EC8 236 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 ENY2Q9NPA8 101 aa10.73□□□□□ -0.69
CAPN1-219ENST00000530495 DNAH6Q9C0G6 4158 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 M0QYG6 137 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 NPY1RP25929 384 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 HOXA1P49639 335 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-219ENST00000530495 NUTF2P61970 127 aaKnown RBP10.72□□□□□ -0.69
CAPN1-219ENST00000530495 PSMG4Q5JS54 123 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 LHFPL1Q86WI0 220 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 SEPSECSQ9HD40 501 aaKnown RBP10.72□□□□□ -0.69
CAPN1-219ENST00000530495 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
CAPN1-219ENST00000530495 YPEL3P61236 119 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-219ENST00000530495 LGALS9BQ3B8N2 356 aa10.71□□□□□ -0.69
CAPN1-219ENST00000530495 AARDQ4LEZ3 155 aa10.71□□□□□ -0.69
CAPN1-219ENST00000530495 Q8WTZ3 238 aa10.71□□□□□ -0.69
CAPN1-219ENST00000530495 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
CAPN1-219ENST00000530495 A0A0G2JRQ6 117 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 RPS10-NUDT3A0A1W2PQS6 291 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 H3BMM0 161 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 M0R2N4 97 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 HNRNPCP07910 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
CAPN1-219ENST00000530495 IGLC1P0CG04 106 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 ELK1P19419 428 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 UCP1P25874 307 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 HTR2BP41595 481 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 SPCS3P61009 180 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 SNRPD3P62318 126 aaKnown RBP10.7□□□□□ -0.7
CAPN1-219ENST00000530495 TRIM16LQ309B1 348 aa10.7□□□□□ -0.7
CAPN1-219ENST00000530495 SP6Q3SY56 376 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms