RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 FAM103A1Q9BTL3 118 aaKnown RBP15.75■□□□□ 0.11
PCF11-203ENST00000530304 FNDC4Q9H6D8 234 aaPredicted RBP15.75■□□□□ 0.11
PCF11-203ENST00000530304 CGB1A6NKQ9 187 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 C17orf100A8MU93 164 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 COX19Q49B96 90 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 MRPL54Q6P161 138 aaKnown RBP15.75■□□□□ 0.11
PCF11-203ENST00000530304 RBMXL3Q8N7X1 1067 aaKnown RBP15.75■□□□□ 0.11
PCF11-203ENST00000530304 CDC42EP3Q9UKI2 254 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 ARFGEF3Q5TH69 2177 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 A0A1W2PN81 502 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 CA1P00915 261 aaPredicted RBP15.74■□□□□ 0.11
PCF11-203ENST00000530304 IGHV3-48P01763 117 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 AMY1AP04745 511 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 PYYP10082 97 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 OR10J3Q5JRS4 329 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 C10orf55Q5SWW7 151 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 OR10X1Q8NGY0 326 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 TMEM167AQ8TBQ9 72 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 C20orf144Q9BQM9 153 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 MGAQ8IWI9 3026 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 COMPP49747 757 aaPredicted RBP15.74■□□□□ 0.11
PCF11-203ENST00000530304 ADIPOQQ15848 244 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 ASPHD1Q5U4P2 390 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 FAM57AQ8TBR7 257 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 FAM168AQ92567 244 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 NPIPB3Q92617 1050 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 ZNF355PQ9NSJ1 428 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 PAM16Q9Y3D7 125 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 RNF114Q9Y508 228 aa15.74■□□□□ 0.11
PCF11-203ENST00000530304 CNOT1A5YKK6 2376 aaKnown RBP15.74■□□□□ 0.11
PCF11-203ENST00000530304 COX7A2P2O60397 106 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 CRYABP02511 175 aaKnown RBP15.73■□□□□ 0.11
PCF11-203ENST00000530304 C10orf113Q5VZT2 155 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 FBXL7Q9UJT9 491 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 AMMECR1Q9Y4X0 333 aaPredicted RBP15.73■□□□□ 0.11
PCF11-203ENST00000530304 RP1L1Q8IWN7 2480 aaPredicted RBP15.73■□□□□ 0.11
PCF11-203ENST00000530304 TDGF1P3P51864 188 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 TMEM183BQ1AE95 376 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 PATE2Q6UY27 113 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 VSTM2AQ8TAG5 236 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 H1FXQ92522 213 aaKnown RBP15.73■□□□□ 0.11
PCF11-203ENST00000530304 RCHY1Q96PM5 261 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 PAXXQ9BUH6 204 aa15.73■□□□□ 0.11
PCF11-203ENST00000530304 BMPR1BO00238 502 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 PDPNQ86YL7 162 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 WFDC8Q8IUA0 241 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 OR4A5Q8NH83 315 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 TBL2Q9Y4P3 447 aaKnown RBP15.72■□□□□ 0.11
PCF11-203ENST00000530304 DPRXA6NFQ7 191 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 ZNF253O75346 499 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 HLA-DQA1P01909 254 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 SRIP30626 198 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 OR1L4Q8NGR5 311 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 MIEN1Q9BRT3 115 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 VAMP8Q9BV40 100 aa15.72■□□□□ 0.11
PCF11-203ENST00000530304 SSBP3Q9BWW4 388 aaPredicted RBP15.72■□□□□ 0.11
PCF11-203ENST00000530304 ZNF430Q9H8G1 570 aaPredicted RBP15.72■□□□□ 0.11
PCF11-203ENST00000530304 IGKV1D-37A0A075B6S9 117 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 PPIAL4EA0A075B759 164 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 A0A1W2PS18 150 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 TCRBV4S1A1TA0A5B7 111 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 IZUMO1RA6ND01 250 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 PPIAL4DF5H284 164 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 IGLV2-23P01705 113 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 PPIAL4FP0DN26 164 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 PPIAL4AQ9Y536 164 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 KRTDAPP60985 99 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 ZNF329Q86UD4 541 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 CCL17Q92583 94 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 TMEM186Q96B77 213 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 KCNS1Q96KK3 526 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 SAP30LQ9HAJ7 183 aa15.71■□□□□ 0.11
PCF11-203ENST00000530304 MRPL36Q9P0J6 103 aaKnown RBP15.71■□□□□ 0.11
PCF11-203ENST00000530304 TMEM178BH3BS89 294 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 AMTP48728 403 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 SUB1P53999 127 aaKnown RBP eCLIP15.7■□□□□ 0.1
PCF11-203ENST00000530304 LYPD2Q6UXB3 125 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 NRN1Q9NPD7 142 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 ZNF586Q9NXT0 402 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 TRAV34A0A0B4J273 112 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 C16orf97H3BN30 126 aa15.7■□□□□ 0.1
PCF11-203ENST00000530304 FSTL3O95633 263 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 APCSP02743 223 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 BPIFB3P59826 476 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 BSPH1Q075Z2 132 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 Q8N976 141 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 ST6GALNAC6Q969X2 333 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 WASHC3Q9Y3C0 194 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 A0A0G2JNJ9 132 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 PEX7O00628 323 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 REG1AP05451 166 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 PMCHP20382 165 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 FAM71F2Q6NXP2 309 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 THAP8Q8NA92 274 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 FXYD5Q96DB9 178 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 ZNF331Q9NQX6 463 aaPredicted RBP15.69■□□□□ 0.1
PCF11-203ENST00000530304 Q9UFV3 132 aa15.69■□□□□ 0.1
PCF11-203ENST00000530304 NDUFB3O43676 98 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 RITA1Q96K30 269 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 BSNQ9UPA5 3926 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms