RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 A0A1B0GU03 582 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 WRBO00258 174 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 MED6O75586 246 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 NXPH3O95157 252 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 NDUFB8O95169 186 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 LY6G6CO95867 125 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 BTCP35070 178 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 BTNL8Q6UX41 500 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 LHFPL5Q8TAF8 219 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 MISP3Q96FF7 219 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 CXorf58Q96LI9 332 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 KRTAP17-1Q9BYP8 105 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 TBC1D24Q9ULP9 559 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
USH1C-208ENST00000529563 TRBV7-1A0A0A6YYK4 115 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 FAM25EA8MYX2 175 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 E7EUB6 86 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 SCGB2A1O75556 95 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 CLEC3BP05452 202 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 CRYGCP07315 174 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 CTRB1P17538 263 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 CTRB2Q6GPI1 263 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 PINX1Q96BK5 328 aaKnown RBP9.12□□□□□ -0.95
USH1C-208ENST00000529563 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
USH1C-208ENST00000529563 PAIP2BQ9ULR5 123 aaKnown RBP9.12□□□□□ -0.95
USH1C-208ENST00000529563 F11RQ9Y624 299 aaKnown RBP9.12□□□□□ -0.95
USH1C-208ENST00000529563 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 DBX1A6NMT0 343 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 INMT-MINDY4F8WBC2 141 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 IFNA10P01566 189 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 GPR183P32249 361 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 RPP30P78346 268 aaKnown RBP9.11□□□□□ -0.95
USH1C-208ENST00000529563 WT1-ASQ06250 92 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 TM4SF20Q53R12 229 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 NRARPQ7Z6K4 114 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 C12orf45Q8N5I9 185 aaPredicted RBP9.11□□□□□ -0.95
USH1C-208ENST00000529563 UBAC2Q8NBM4 344 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 OR52E5Q8NH55 327 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 ZNF431Q8TF32 576 aaPredicted RBP9.11□□□□□ -0.95
USH1C-208ENST00000529563 MARC2Q969Z3 335 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 GSKIPQ9P0R6 139 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 MLXQ9UH92 298 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 UFC1Q9Y3C8 167 aa9.11□□□□□ -0.95
USH1C-208ENST00000529563 EPPK1P58107 5090 aaKnown RBP9.11□□□□□ -0.95
USH1C-208ENST00000529563 IGHV3-35A0A0C4DH35 117 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 A0A0G2JRQ6 117 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 TMEM213A2RRL7 107 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 A8MWP6 167 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 CORTO00230 105 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 PRAF2O60831 178 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 SCGB1D2O95969 90 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 SLC25A6P12236 298 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 HTR2BP41595 481 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 APOC4P55056 127 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 Q56UQ5 140 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 GGNBP1Q5YKI7 109 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 OR2C3Q8N628 320 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 OR1P1Q8NH06 330 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 DTD1Q8TEA8 209 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 FANCD2OSQ96PS1 177 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 SEC22CQ9BRL7 303 aa9.1□□□□□ -0.95
USH1C-208ENST00000529563 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 TRAV25A0A0B4J276 109 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 A0A1B0GW64 132 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 RPS10-NUDT3A0A1W2PQS6 291 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 MFSD2BA6NFX1 497 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 CGB1A6NKQ9 187 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 ADAP1O75689 374 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 P0C879 139 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 RAB11AP62491 216 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 TNFRSF9Q07011 255 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
USH1C-208ENST00000529563 NMSQ5H8A3 153 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 LAMTOR1Q6IAA8 161 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 Q6ZRM9 215 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 DUSP18Q8NEJ0 188 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 MITD1Q8WV92 249 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 CIB3Q96Q77 187 aaPredicted RBP9.09□□□□□ -0.95
USH1C-208ENST00000529563 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 MRPL27Q9P0M9 148 aaKnown RBP9.09□□□□□ -0.95
USH1C-208ENST00000529563 UBQLN2Q9UHD9 624 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 DMRT1Q9Y5R6 373 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
USH1C-208ENST00000529563 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 IGHV3-21A0A0B4J1V1 117 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 FAM90A26D6RGX4 464 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 SPRY2O43597 315 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 SSNA1O43805 119 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 PTTG1O95997 202 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 IFNA4P05014 189 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 IL5P05113 134 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 OPRK1P41145 380 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
USH1C-208ENST00000529563 IFITM3Q01628 133 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms