RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TMEM116Q8NCL8 245 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 OR1S1Q8NH92 325 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 IL22RA2Q969J5 263 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 TM2D3Q9BRN9 247 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 GINS3Q9BRX5 216 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 RHPN1-AS1Q9BWJ2 59 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 UBQLN2Q9UHD9 624 aa10.73□□□□□ -0.69
CAPN1-216ENST00000528739 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 TMEM50AO95807 157 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 IFNA10P01566 189 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 FCGR2BP31994 310 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-216ENST00000528739 BMI1P35226 326 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 TFPI2P48307 235 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 CCR6P51684 374 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
CAPN1-216ENST00000528739 SLC24A4Q8NFF2 622 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 SPAG8Q99932 426 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-216ENST00000528739 SLC25A21Q9BQT8 299 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-216ENST00000528739 CACFD1Q9UGQ2 172 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
CAPN1-216ENST00000528739 PUS1Q9Y606 427 aaKnown RBP eCLIP10.72□□□□□ -0.69
CAPN1-216ENST00000528739 PIGBOS1A0A0B4J2F0 54 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 SUPT4H1P63272 117 aaKnown RBP10.71□□□□□ -0.69
CAPN1-216ENST00000528739 SMCO1Q147U7 214 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 TMEM128Q5BJH2 165 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 TOMM20LQ6UXN7 152 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 ZNF600Q6ZNG1 722 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 NOXA1Q86UR1 476 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 RNF2Q99496 336 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 SRRQ9GZT4 340 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 RETNQ9HD89 108 aa10.71□□□□□ -0.69
CAPN1-216ENST00000528739 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 RBMY1BA6NDE4 496 aaKnown RBP10.7□□□□□ -0.7
CAPN1-216ENST00000528739 RBMY1EA6NEQ0 496 aaKnown RBP10.7□□□□□ -0.7
CAPN1-216ENST00000528739 OR4C46A6NHA9 309 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 CENPXA8MT69 81 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 CHEK1O14757 476 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 TSPAN4O14817 238 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 CLN5O75503 358 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
CAPN1-216ENST00000528739 NPY1RP25929 384 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 WFDC3Q8IUB2 231 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 CENPSQ8N2Z9 138 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 GBGT1Q8N5D6 347 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 FNDC4Q9H6D8 234 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-216ENST00000528739 NDUFA13Q9P0J0 144 aa10.7□□□□□ -0.7
CAPN1-216ENST00000528739 PAIP2BQ9ULR5 123 aaKnown RBP10.7□□□□□ -0.7
CAPN1-216ENST00000528739 LOC102724200A0A096LPH7 203 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-216ENST00000528739 IFNA4P05014 189 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 TNFRSF9Q07011 255 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 RBMS2Q15434 407 aaKnown RBP10.69□□□□□ -0.7
CAPN1-216ENST00000528739 BAK1Q16611 211 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 C2orf83Q53S99 150 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 ETFRF1Q6IPR1 90 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 OR4X1Q8NH49 305 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 MUC7Q8TAX7 377 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 DTD1Q8TEA8 209 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 NARS2Q96I59 477 aaKnown RBP10.69□□□□□ -0.7
CAPN1-216ENST00000528739 OR10C1Q96KK4 312 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 FAM110AQ9BQ89 295 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 RBKSQ9H477 322 aa10.69□□□□□ -0.7
CAPN1-216ENST00000528739 TRAV30A0A087WSZ9 112 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 A0A1B0GU03 582 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 NAP1L6A6NFF2 107 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 C3orf84H3BNL1 204 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 DNASE2O00115 360 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-216ENST00000528739 SFT2D2O95562 160 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 HOXB5P09067 269 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 NPPCP23582 126 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 RND2P52198 227 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 TIGITQ495A1 244 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 AARDQ4LEZ3 155 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 NMSQ5H8A3 153 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 RNASEH2CQ8TDP1 164 aaKnown RBP10.68□□□□□ -0.7
CAPN1-216ENST00000528739 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 METTL26Q96S19 204 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 TMEM231Q9H6L2 316 aa10.68□□□□□ -0.7
CAPN1-216ENST00000528739 MRPL36Q9P0J6 103 aaKnown RBP10.68□□□□□ -0.7
CAPN1-216ENST00000528739 SLC25A4P12235 298 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 LYL1P12980 280 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 BSXQ3C1V8 233 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 PVRIGQ6DKI7 326 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 LINC00322Q6ZN03 302 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-216ENST00000528739 Q8WTZ3 238 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 ST8SIA2Q92186 375 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 CITED4Q96RK1 184 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 U3KQ87 197 aa10.67□□□□□ -0.7
CAPN1-216ENST00000528739 DUXBA0A1W2PPF3 345 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 A0A1W2PS18 150 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 APOHP02749 345 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-216ENST00000528739 IAPPP10997 89 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms