RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TRAV14DV4A0A0A6YYC5 116 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 KIR2DL5BA0A0G2JN68 375 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 KIR2DL5BA0A0G2JPC4 375 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 IGHV7-4-1A0A0J9YVY3 117 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 TEX13DA0A0J9YY54 714 aaPredicted RBP7.77□□□□□ -1.17
CPSF1-203ENST00000527916 DISC1C4P0D8 188 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 CHEK1O14757 476 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 GSTZ1O43708 216 aaPredicted RBP7.77□□□□□ -1.17
CPSF1-203ENST00000527916 CD5P06127 495 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 AKAIN1P0CW23 69 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 RPL5P46777 297 aaKnown RBP7.77□□□□□ -1.17
CPSF1-203ENST00000527916 PPP5CP53041 499 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 PRR20EP86478 221 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 PRR20CP86479 221 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 PRR20DP86480 221 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 PRR20BP86481 221 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 PRR20AP86496 221 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 DHODHQ02127 395 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 BSXQ3C1V8 233 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 FAM90A2PQ658T7 463 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 KIR2DL5AQ8N109 375 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 STPG3Q8N7X2 389 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 SLC35G3Q8N808 338 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 KIR2DL5BQ8NHK3 375 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 DIRAS2Q96HU8 199 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 RHPN1-AS1Q9BWJ2 59 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 MFFQ9GZY8 342 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM222Q9H0R3 208 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.77□□□□□ -1.17
CPSF1-203ENST00000527916 CACFD1Q9UGQ2 172 aa7.77□□□□□ -1.17
CPSF1-203ENST00000527916 RSL24D1Q9UHA3 163 aaKnown RBP7.77□□□□□ -1.17
CPSF1-203ENST00000527916 C14orf166Q9Y224 244 aaKnown RBP7.77□□□□□ -1.17
CPSF1-203ENST00000527916 YIF1AO95070 293 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM50AO95807 157 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 RNASE2P10153 161 aaKnown RBP7.76□□□□□ -1.17
CPSF1-203ENST00000527916 ETV6P41212 452 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 SPCS3P61009 180 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 IL18Q14116 193 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 ODF3L2Q3SX64 289 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 ZNF600Q6ZNG1 722 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 Q6ZRM9 215 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 RBPMSQ93062 196 aaKnown RBP7.76□□□□□ -1.17
CPSF1-203ENST00000527916 PINX1Q96BK5 328 aaKnown RBP7.76□□□□□ -1.17
CPSF1-203ENST00000527916 RNF183Q96D59 192 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 PRRT1Q99946 306 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 SOSTQ9BQB4 213 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 GINS3Q9BRX5 216 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 SLIRPQ9GZT3 109 aaKnown RBP7.76□□□□□ -1.17
CPSF1-203ENST00000527916 NAA60Q9H7X0 242 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 ENY2Q9NPA8 101 aa7.76□□□□□ -1.17
CPSF1-203ENST00000527916 FAT2Q9NYQ8 4349 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 IGHV3OR16-8A0A075B7F1 116 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 A0A0G2JRQ6 117 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 ANKRD20A5PA0PJZ0 165 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 CRYM-AS1A6NIL9 109 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 ZNF207O43670 478 aaKnown RBP7.75□□□□□ -1.17
CPSF1-203ENST00000527916 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 OR5AC1P0C628 307 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 HTR2BP41595 481 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 RBMS2Q15434 407 aaKnown RBP7.75□□□□□ -1.17
CPSF1-203ENST00000527916 SPINK9Q5DT21 86 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 TOMM20LQ6UXN7 152 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 SELENOHQ8IZQ5 122 aaKnown RBP7.75□□□□□ -1.17
CPSF1-203ENST00000527916 OR4C16Q8NGL9 310 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 OR4X1Q8NH49 305 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 IL22RA2Q969J5 263 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 GALNT14Q96FL9 552 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 SCGB3A2Q96PL1 93 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 RNF2Q99496 336 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 VSIRQ9H7M9 311 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 UBQLN2Q9UHD9 624 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 KCNIP3Q9Y2W7 256 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
CPSF1-203ENST00000527916 TRAV30A0A087WSZ9 112 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 TRAV2A0A0B4J234 112 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 FABP12A6NFH5 140 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 CLN5O75503 358 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 SCGB2A1O75556 95 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 TNFSF8P32971 234 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 HOXA1P49639 335 aaPredicted RBP7.74□□□□□ -1.17
CPSF1-203ENST00000527916 PAFAH1B2P68402 229 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 FAAP20Q6NZ36 180 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 RNASE11Q8TAA1 199 aaKnown RBP7.74□□□□□ -1.17
CPSF1-203ENST00000527916 LHFPL5Q8TAF8 219 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 C11orf45Q8TAV5 145 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 C6orf62Q9GZU0 229 aaPredicted RBP7.74□□□□□ -1.17
CPSF1-203ENST00000527916 FNDC4Q9H6D8 234 aaPredicted RBP7.74□□□□□ -1.17
CPSF1-203ENST00000527916 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 FBXL17Q9UF56 701 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 SCP2D1Q9UJQ7 156 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 PUS1Q9Y606 427 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPSF1-203ENST00000527916 DNAH2Q9P225 4427 aa7.74□□□□□ -1.17
CPSF1-203ENST00000527916 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 RPS10-NUDT3A0A1W2PQS6 291 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 H3BMQ9 156 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 NOL3O60936 208 aaKnown RBP7.73□□□□□ -1.17
CPSF1-203ENST00000527916 NPPCP23582 126 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 C2orf83Q53S99 150 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 OR51S1Q8NGJ8 323 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms