RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 Q6ZVL8 140 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 C1QL2Q7Z5L3 287 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 PPP1R27Q86WC6 154 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 RBMXL3Q8N7X1 1067 aaKnown RBP4.77□□□□□ -1.65
CD44-225ENST00000527326 TMEM178AQ8NBL3 297 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 VN1R2Q8NFZ6 395 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 OR10J6PQ8NGY7 276 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 NT5CQ8TCD5 201 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 IL1F10Q8WWZ1 152 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 NAT6Q93015 286 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 DEFB118Q96PH6 123 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 ENY2Q9NPA8 101 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 STARD5Q9NSY2 213 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 SELENOKQ9Y6D0 94 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 HLA-DRB4X5D2U9 266 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 MUC3AQ02505 3323 aa4.77□□□□□ -1.65
CD44-225ENST00000527326 LOC102723996A0A087X1L8 192 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 IGKV1-9A0A0C4DH69 117 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 NPIPB13A6NJU9 1138 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 NPIPB4C9JG80 1138 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 F5H768 121 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 SYNGR3O43761 229 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 SPINK4O60575 86 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 TUSC2O75896 110 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 FCGR2AP12318 317 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 PPIFP30405 207 aaKnown RBP4.76□□□□□ -1.65
CD44-225ENST00000527326 CSN1S1P47710 185 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 MEOX1P50221 254 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 DAP3P51398 398 aaKnown RBP4.76□□□□□ -1.65
CD44-225ENST00000527326 MRPL23Q16540 153 aaKnown RBP4.76□□□□□ -1.65
CD44-225ENST00000527326 RRN3P1Q2M238 152 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 DUSP28Q4G0W2 176 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 CENPWQ5EE01 88 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 SLC25A53Q5H9E4 307 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 CFAP126Q5VTH2 177 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 Q6P435 159 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 FAM159AQ6UWV7 190 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 ACP7Q6ZNF0 438 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 ZNF818PQ6ZRF7 136 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 H1FNTQ75WM6 255 aaPredicted RBP4.76□□□□□ -1.65
CD44-225ENST00000527326 RNF144BQ7Z419 303 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 PPP1R32Q7Z5V6 425 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 BCL6BQ8N143 479 aaPredicted RBP4.76□□□□□ -1.65
CD44-225ENST00000527326 GAPTQ8N292 157 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 OSR2Q8N2R0 312 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 NUP35Q8NFH5 326 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 OR2A1Q8NGT9 310 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 OR51H1Q8NH63 302 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 PIGCQ92535 297 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 CDX2Q99626 313 aaPredicted RBP4.76□□□□□ -1.65
CD44-225ENST00000527326 IL23AQ9NPF7 189 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 PRTFDC1Q9NRG1 225 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 CACNG5Q9UF02 275 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 SIT1Q9Y3P8 196 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 INSIG2Q9Y5U4 225 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 KIAA1549LQ6ZVL6 1849 aa4.76□□□□□ -1.65
CD44-225ENST00000527326 TTC28Q96AY4 2481 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 KIF26BQ2KJY2 2108 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 KIAA2026Q5HYC2 2103 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 IGKV1-8A0A0C4DH67 115 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 A0A0G2JRQ6 117 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.75□□□□□ -1.65
CD44-225ENST00000527326 A0A1B0GXF2 115 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 SHISA9B4DS77 424 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.75□□□□□ -1.65
CD44-225ENST00000527326 PGLYRP1O75594 196 aaPredicted RBP4.75□□□□□ -1.65
CD44-225ENST00000527326 IGKV1D-16P01601 117 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 IGHG1P01857 330 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 P04436 131 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 CSN3P07498 182 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 ARL14EPLP0DKL9 152 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 MYOD1P15172 320 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 GCHFRP30047 84 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 GLRXP35754 106 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 MFAP2P55001 183 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 HBBP68871 147 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 MALLQ13021 153 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 FAM53BQ14153 422 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 PRR31Q5SQ13 230 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 LINC00173Q6ZV60 143 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 CEND1Q8N111 149 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 LINC01356Q8N9X3 169 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 DLX4Q92988 240 aaPredicted RBP4.75□□□□□ -1.65
CD44-225ENST00000527326 FAM131CQ96AQ9 280 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 LINC00479Q96M42 142 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 RASL11BQ9BPW5 248 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 ZNF747Q9BV97 191 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 FGF22Q9HCT0 170 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 IL36RNQ9UBH0 155 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 WDR83OSQ9Y284 106 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 KLF12Q9Y4X4 402 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 DOCK8Q8NF50 2099 aa4.75□□□□□ -1.65
CD44-225ENST00000527326 LTBP2Q14767 1821 aa4.74□□□□□ -1.65
CD44-225ENST00000527326 TRPM6Q9BX84 2022 aa4.74□□□□□ -1.65
CD44-225ENST00000527326 SCN3AQ9NY46 2000 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms