RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
SSSCA1-203ENST00000526877 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
SSSCA1-203ENST00000526877 SERTAD4Q9NUC0 356 aa9.93□□□□□ -0.82
SSSCA1-203ENST00000526877 UQCC1Q9NVA1 299 aa9.93□□□□□ -0.82
SSSCA1-203ENST00000526877 THYN1Q9P016 225 aa9.93□□□□□ -0.82
SSSCA1-203ENST00000526877 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
SSSCA1-203ENST00000526877 CMYA5Q8N3K9 4069 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 PRSS46E5RG02 174 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 FNDC10F2Z333 226 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 OPRK1P41145 380 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 DEFA6Q01524 100 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 CD69Q07108 199 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 UBAC2Q8NBM4 344 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 OR2T6Q8NHC8 308 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 STOML3Q8TAV4 291 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 WIPF2Q8TF74 440 aaPredicted RBP9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 SLC35E1Q96K37 410 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 SLA2Q9H6Q3 261 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 NPVFQ9HCQ7 196 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 ZNF355PQ9NSJ1 428 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 TGP01266 2768 aa9.92□□□□□ -0.82
SSSCA1-203ENST00000526877 UBE2L5PA0A1B0GUS4 154 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 G3V318 75 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 MFAP2P55001 183 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 VWC2Q2TAL6 325 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 Q6ZS46 218 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 C19orf35Q6ZS72 473 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 SLC16A13Q7RTY0 426 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 KLHDC1Q8N7A1 406 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 ST8SIA2Q92186 375 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 PARD6GQ9BYG4 376 aaPredicted RBP9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 LINC00527Q9UJ94 153 aa9.91□□□□□ -0.82
SSSCA1-203ENST00000526877 IGLV11-55A0A075B6I3 123 aa9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 MT-CO2P00403 227 aa9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 AKR1C1Q04828 323 aa9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 C19orf54Q5BKX5 351 aa9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 GNPNAT1Q96EK6 184 aaPredicted RBP9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 WDR61Q9GZS3 305 aaKnown RBP9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
SSSCA1-203ENST00000526877 H3BUA1 57 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 MPDU1O75352 247 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 IFNA7P01567 189 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 PRH1P02810 166 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 FGF7P21781 194 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 SLC35B1P78383 322 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 RAB31Q13636 194 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 GAMTQ14353 236 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 MLANAQ16655 118 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 KLK9Q2XQG4 91 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 TMEM144Q7Z5S9 345 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 C11orf44Q8N8P7 122 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 ZNF709Q8N972 641 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 HSD17B11Q8NBQ5 300 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 PHYHIPLQ96FC7 376 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 NOL4LQ96MY1 436 aaPredicted RBP9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 GINS3Q9BRX5 216 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 ARV1Q9H2C2 271 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 FNDC4Q9H6D8 234 aaPredicted RBP9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 KLK9Q9UKQ9 250 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 DMRT1Q9Y5R6 373 aa9.89□□□□□ -0.83
SSSCA1-203ENST00000526877 C17orf112F2Z3M2 114 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 I3L2K1 104 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 OR2J3O76001 311 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 BRI3O95415 125 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 PPIFP30405 207 aaKnown RBP9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 ACSM6Q6P461 480 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 TEPPQ6URK8 271 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 TEX261Q6UWH6 196 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 BTNL8Q6UX41 500 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 NECAP1Q8NC96 275 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 FBXL7Q9UJT9 491 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 WDR83OSQ9Y284 106 aa9.88□□□□□ -0.83
SSSCA1-203ENST00000526877 TRBV9A0A0B4J1U6 114 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 IGHV3-21A0A0B4J1V1 117 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 FAM223BA6NKX1 122 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 K7EIM0 57 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 NDUFB8O95169 186 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 SEC11BP0C7V7 166 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 ATP6V0CP27449 155 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 RND2P52198 227 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 MFAP4P55083 255 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 RHOGP84095 191 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 TMEM95Q3KNT9 176 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 ZNF767PQ75MW2 155 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 FAM223AQ8IWN6 122 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 ZNF680Q8NEM1 530 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 VN1R17PQ8TDU5 208 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 CXorf58Q96LI9 332 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 MS4A10Q96PG2 267 aa9.87□□□□□ -0.83
SSSCA1-203ENST00000526877 PSMB11A5LHX3 300 aa9.86□□□□□ -0.83
SSSCA1-203ENST00000526877 ADARB2-AS1A8MUL3 147 aa9.86□□□□□ -0.83
SSSCA1-203ENST00000526877 SOX15O60248 233 aa9.86□□□□□ -0.83
SSSCA1-203ENST00000526877 CFDP00746 253 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms