RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 OR4D5Q8NGN0 318 aa13.12□□□□□ -0.31
LMX1B-203ENST00000526117 OR4X1Q8NH49 305 aa13.12□□□□□ -0.31
LMX1B-203ENST00000526117 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
LMX1B-203ENST00000526117 PINX1Q96BK5 328 aaKnown RBP13.12□□□□□ -0.31
LMX1B-203ENST00000526117 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
LMX1B-203ENST00000526117 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-203ENST00000526117 IGHV3-21A0A0B4J1V1 117 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 TMEM213A2RRL7 107 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 C2orf70A6NJV1 201 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 SYNGR2O43760 224 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 NXPH3O95157 252 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 OPRK1P41145 380 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 ADAMTSL5Q6ZMM2 481 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 TMEM116Q8NCL8 245 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 ZNF414Q96IQ9 312 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 TECRQ9NZ01 308 aaKnown RBP13.11□□□□□ -0.31
LMX1B-203ENST00000526117 UFC1Q9Y3C8 167 aa13.11□□□□□ -0.31
LMX1B-203ENST00000526117 MPTX1A8MV57 137 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 K7EMT4 169 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 GNG7O60262 68 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 PRAF2O60831 178 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 IFNA10P01566 189 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 UNQ9165/PRO28630Q6UXU0 137 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 UBAC2Q8NBM4 344 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 OR10C1Q96KK4 312 aa13.1□□□□□ -0.31
LMX1B-203ENST00000526117 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 C15orf62A8K5M9 175 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 SNRPGP15A8MWD9 76 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 K7EIL1 84 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 CLN5O75503 358 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 TMEM50AO95807 157 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 FOLR2P14207 255 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 CBLN1P23435 193 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 NKX2-1P43699 371 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-203ENST00000526117 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
LMX1B-203ENST00000526117 LCN12Q6JVE5 192 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 C12orf45Q8N5I9 185 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-203ENST00000526117 SEC22CQ9BRL7 303 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
LMX1B-203ENST00000526117 ZC4H2Q9NQZ6 224 aa13.09□□□□□ -0.31
LMX1B-203ENST00000526117 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
LMX1B-203ENST00000526117 WI2-2373I1.2A0A1W2PRP0 233 aa13.08□□□□□ -0.32
LMX1B-203ENST00000526117 PRB2P02812 416 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-203ENST00000526117 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-203ENST00000526117 CD69Q07108 199 aa13.08□□□□□ -0.32
LMX1B-203ENST00000526117 IAH1Q2TAA2 248 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-203ENST00000526117 C11orf87Q6NUJ2 197 aa13.08□□□□□ -0.32
LMX1B-203ENST00000526117 PRSS54Q6PEW0 395 aa13.08□□□□□ -0.32
LMX1B-203ENST00000526117 ZBTB8BQ8NAP8 495 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-203ENST00000526117 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
LMX1B-203ENST00000526117 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-203ENST00000526117 PRKDCP78527 4128 aaKnown RBP13.08□□□□□ -0.32
LMX1B-203ENST00000526117 ZNF320A2RRD8 509 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 IGHV3-48P01763 117 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 SPNP16150 400 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 RAB11AP62491 216 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 DEFB114Q30KQ6 69 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 ZNF600Q6ZNG1 722 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 MRAPQ8TCY5 172 aa13.07□□□□□ -0.32
LMX1B-203ENST00000526117 MRPL36Q9P0J6 103 aaKnown RBP13.07□□□□□ -0.32
LMX1B-203ENST00000526117 INMT-MINDY4F8WBC2 141 aa13.06□□□□□ -0.32
LMX1B-203ENST00000526117 GP9P14770 177 aa13.06□□□□□ -0.32
LMX1B-203ENST00000526117 TAS2R30P59541 319 aa13.06□□□□□ -0.32
LMX1B-203ENST00000526117 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
LMX1B-203ENST00000526117 LSM4Q9Y4Z0 139 aaKnown RBP13.06□□□□□ -0.32
LMX1B-203ENST00000526117 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 PTTG1O95997 202 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 IFNA4P05014 189 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 IAPPP10997 89 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 YPEL3P61236 119 aaPredicted RBP13.05□□□□□ -0.32
LMX1B-203ENST00000526117 MLANAQ16655 118 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 UXS1Q8NBZ7 420 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 DYNLRB2Q8TF09 96 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 RAB40CQ96S21 281 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 MAGT1Q9H0U3 335 aa13.05□□□□□ -0.32
LMX1B-203ENST00000526117 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 WRBO00258 174 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 RND2P52198 227 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 POLR2GP62487 172 aaKnown RBP eCLIP13.04□□□□□ -0.32
LMX1B-203ENST00000526117 CD300EQ496F6 205 aaPredicted RBP13.04□□□□□ -0.32
LMX1B-203ENST00000526117 C2orf50Q96LR7 162 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 PRR25Q96S07 402 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 GINS3Q9BRX5 216 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 ZFAND3Q9H8U3 227 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 MLXQ9UH92 298 aa13.04□□□□□ -0.32
LMX1B-203ENST00000526117 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
LMX1B-203ENST00000526117 TSC22D2O75157 780 aa13.03□□□□□ -0.32
LMX1B-203ENST00000526117 EDN2P20800 178 aa13.03□□□□□ -0.32
LMX1B-203ENST00000526117 OR10J1P30954 320 aa13.03□□□□□ -0.32
LMX1B-203ENST00000526117 IL15RAQ13261 267 aa13.03□□□□□ -0.32
LMX1B-203ENST00000526117 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms