RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ZNF137PP52743 207 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 OR4S2Q8NH73 311 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 DDB2Q92466 427 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 OR2V2Q96R30 315 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 REG1AP05451 166 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 RUSC1-AS1Q66K80 236 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 IGF2BP2-AS1Q96M15 143 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 OR8B2Q96RD0 313 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 RELNP78509 3460 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 S100A7P31151 101 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 PRB3Q04118 309 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-202ENST00000524773 C17orf58Q2M2W7 97 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 WDR73Q6P4I2 378 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 ZNF841Q6ZN19 808 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 TMEM14BQ9NUH8 114 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 LOC105371242A0A075B767 164 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 SNAI2O43623 268 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 RBX1P62877 108 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 C9orf106Q8NAJ2 232 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 MDS2Q8NDY4 140 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 PRR7Q8TB68 274 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
CAPN1-202ENST00000524773 CNOT1A5YKK6 2376 aaKnown RBP10.72□□□□□ -0.69
CAPN1-202ENST00000524773 OTOGLQ3ZCN5 2332 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 PPOXP50336 477 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 FOXE3Q13461 319 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 AARDQ4LEZ3 155 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 DHRS13Q6UX07 377 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 NUDT10Q8NFP7 164 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 NUDT11Q96G61 164 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 TNFRSF19Q9NS68 423 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 JPT1Q9UK76 154 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 COL27A1Q8IZC6 1860 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-202ENST00000524773 HIGD1CA8MV81 97 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 SLC25A2Q9BXI2 301 aa10.71□□□□□ -0.69
CAPN1-202ENST00000524773 MRPL36Q9P0J6 103 aaKnown RBP10.71□□□□□ -0.69
CAPN1-202ENST00000524773 PCNX1Q96RV3 2341 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 IGHV1-18A0A0C4DH31 117 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 TEX50A0A1B0GTY4 177 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 HLA-DQA1P01909 254 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 CA7P43166 264 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 SELENOVP59797 346 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 MPV17L2Q567V2 206 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 LEMD1Q68G75 181 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 FAM216BQ8N7L0 139 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 CCL13Q99616 98 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 SLC25A33Q9BSK2 321 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 SPRY4Q9C004 299 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 TMEM167BQ9NRX6 74 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 AMMECR1Q9Y4X0 333 aaPredicted RBP10.71□□□□□ -0.7
CAPN1-202ENST00000524773 ARL2-SNX15V9GYD0 113 aa10.71□□□□□ -0.7
CAPN1-202ENST00000524773 TRBV9A0A0B4J1U6 114 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 IGHV2OR16-5A0A0B4J2B6 119 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 IZUMO1RA6ND01 250 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 WT1P19544 449 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-202ENST00000524773 KIR2DL2P43627 348 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-202ENST00000524773 LINC00322Q6ZN03 302 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-202ENST00000524773 Q6ZT83 130 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 ZCCHC24Q8N2G6 241 aaKnown RBP10.7□□□□□ -0.7
CAPN1-202ENST00000524773 ITLN1Q8WWA0 313 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 CBY3A6NI87 242 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 MGST3O14880 152 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 IGKV3-15P01624 115 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 MT-ND6P03923 174 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 VAMP3Q15836 100 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 URB1-AS1Q96HZ7 61 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 FOXA2Q9Y261 457 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-202ENST00000524773 COX11Q9Y6N1 276 aa10.7□□□□□ -0.7
CAPN1-202ENST00000524773 TRGV8A0A0C4DH27 118 aa10.69□□□□□ -0.7
CAPN1-202ENST00000524773 INO80CQ6PI98 192 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-202ENST00000524773 FAM167A-AS1Q96KT0 104 aa10.69□□□□□ -0.7
CAPN1-202ENST00000524773 ALKBH7Q9BT30 221 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-202ENST00000524773 LRBAP50851 2863 aa10.69□□□□□ -0.7
CAPN1-202ENST00000524773 SAA1P0DJI8 122 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-202ENST00000524773 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
CAPN1-202ENST00000524773 OR4F17Q8NGA8 305 aa10.69□□□□□ -0.7
CAPN1-202ENST00000524773 NKX6-3A6NJ46 265 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 SRRM5B3KS81 715 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 MOSP00540 346 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 CSN3P07498 182 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 CT45A6P0DMU7 189 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 CT45A5P0DMU8 189 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 CT45A7P0DMV0 189 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 CCL11P51671 97 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 NPIPB3Q92617 1050 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 BET1LQ9NYM9 111 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
CAPN1-202ENST00000524773 C2orf70A6NJV1 201 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 ORM2P19652 201 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 UBE2G1P62253 170 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms