RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MAP1LC3B2A6NCE7 125 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 RBFOX3A6NFN3 312 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 F8W036 122 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 TMEM250H0YL14 139 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 RRHO14718 337 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 ACTL6BO94805 426 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 MOSP00540 346 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 CA2P00918 260 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 APOC3P02656 99 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 SNRNP70P08621 437 aaKnown RBP5.64□□□□□ -1.51
VPS11-201ENST00000524454 RNASE2P10153 161 aaKnown RBP5.64□□□□□ -1.51
VPS11-201ENST00000524454 FHITP49789 147 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 ARF6P62330 175 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 SELENOTP62341 195 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 PSG5Q15238 335 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 RHEBQ15382 184 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 HCP5Q6MZN7 132 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 RPP25LQ8N5L8 163 aaKnown RBP5.64□□□□□ -1.51
VPS11-201ENST00000524454 OR1P1Q8NH06 330 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 ZNF418Q8TF45 676 aaPredicted RBP5.64□□□□□ -1.51
VPS11-201ENST00000524454 SFT2D1Q8WV19 159 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 CFHR4Q92496 578 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 MALSU1Q96EH3 234 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 TBX15Q96SF7 602 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 RNF2Q99496 336 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 TNFRSF19Q9NS68 423 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 SLC39A9Q9NUM3 307 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 LOC102723971A0A1B0GUV8 181 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 DNAJC9-AS1A6NH13 148 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 SLC25A17O43808 307 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 TOX4O94842 621 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 MT-CO2P00403 227 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 FBP1P09467 338 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 BCL2P10415 239 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 ADCYAP1P18509 176 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 RPL27AP46776 148 aaKnown RBP5.63□□□□□ -1.51
VPS11-201ENST00000524454 REG1BP48304 166 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 HILS1P60008 231 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 CD69Q07108 199 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 PNRC1Q12796 327 aaPredicted RBP5.63□□□□□ -1.51
VPS11-201ENST00000524454 KLRD1Q13241 179 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 MRGPRG-AS1Q2M3A8 158 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 KLK9Q2XQG4 91 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 FAM74A3Q4VXF1 159 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 FFAR4Q5NUL3 377 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 ACSM6Q6P461 480 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 VMO1Q7Z5L0 202 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 Q8N6K4 173 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 THAP8Q8NA92 274 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 OR10G9Q8NGN4 311 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 OR10G7Q8NGN6 311 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 OR2T10Q8NGZ9 312 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 GGTLC1Q9BX51 225 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 NKX6-2Q9C056 277 aaPredicted RBP5.63□□□□□ -1.51
VPS11-201ENST00000524454 WNT10AQ9GZT5 417 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 EIF5A2Q9GZV4 153 aaKnown RBP5.63□□□□□ -1.51
VPS11-201ENST00000524454 SIRT7Q9NRC8 400 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 ZNRD1Q9P1U0 126 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 VAX2Q9UIW0 290 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 KLK9Q9UKQ9 250 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 PRELID1Q9Y255 219 aa5.63□□□□□ -1.51
VPS11-201ENST00000524454 CENPVL3A0A0U1RRI6 287 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 IGLC7A0M8Q6 106 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 B4DEV8 164 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 TIMM23O14925 209 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 AGPAT2O15120 278 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 NBR2O15453 112 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 CRYGCP07315 174 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 COX7A1P24310 79 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 BRS3P32247 399 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 CDC34P49427 236 aaPredicted RBP5.62□□□□□ -1.51
VPS11-201ENST00000524454 LGALS4P56470 323 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 RHOBP62745 196 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 AKR1C1Q04828 323 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 WT1-ASQ06250 92 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 SCGB2A2Q13296 93 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 DIAPH2-AS1Q14236 149 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 DEFB112Q30KQ8 113 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 SOHLH1Q5JUK2 328 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 SLC35E3Q7Z769 313 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 MOB3BQ86TA1 216 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 TEX29Q8N6K0 151 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 TMEM116Q8NCL8 245 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 SPATA3Q8NHX4 192 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 MGST2Q99735 147 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 SSX3Q99909 188 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 TCEAL7Q9BRU2 100 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 MRPL32Q9BYC8 188 aaKnown RBP5.62□□□□□ -1.51
VPS11-201ENST00000524454 TUBA4BQ9H853 241 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 C1RLQ9NZP8 487 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 PXMP4Q9Y6I8 212 aa5.62□□□□□ -1.51
VPS11-201ENST00000524454 A0A087WWC5 75 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 A0A0U1RQK1 487 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 SCO2A0A1W2PP80 73 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 A0A1W2PPV4 95 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 CGB1A6NKQ9 187 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 TEX22C9J3V5 150 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 HOXA3O43365 443 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms