RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 BSPH1Q075Z2 132 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 IBA57Q5T440 356 aaKnown RBP8.96□□□□□ -0.98
HDAC9-228ENST00000524023 FAM71F2Q6NXP2 309 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 WDR73Q6P4I2 378 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 PDPNQ86YL7 162 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 LINC00311Q8N616 119 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 OR5AU1Q8NGC0 362 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF596Q8TC21 504 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 H1FXQ92522 213 aaKnown RBP8.96□□□□□ -0.98
HDAC9-228ENST00000524023 TMEM186Q96B77 213 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 TBX15Q96SF7 602 aa8.96□□□□□ -0.98
HDAC9-228ENST00000524023 FNDC4Q9H6D8 234 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-228ENST00000524023 TNFRSF13BO14836 293 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-228ENST00000524023 IGLV2-23P01705 113 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 MT-ND6P03923 174 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 MGST1P10620 155 aaKnown RBP8.95□□□□□ -0.98
HDAC9-228ENST00000524023 C10orf55Q5SWW7 151 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 LYPD2Q6UXB3 125 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 TMEM136Q6ZRR5 245 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 ST6GALNAC6Q969X2 333 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF430Q9H8G1 570 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-228ENST00000524023 NAT8BQ9UHF3 227 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 PCNX1Q96RV3 2341 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 DMXL2Q8TDJ6 3036 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 EREGO14944 169 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 KLK10O43240 276 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 NDUFB3O43676 98 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 COX7A2P2O60397 106 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 TCL1AP56279 114 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 COX19Q49B96 90 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 DMRTC2Q8IXT2 367 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-228ENST00000524023 C8orf31Q8N9H6 132 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 OR1L4Q8NGR5 311 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 CCL17Q92583 94 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 NPIPB3Q92617 1050 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 HSPB9Q9BQS6 159 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 GNB4Q9HAV0 340 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 CDC42EP3Q9UKI2 254 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 WASHC3Q9Y3C0 194 aa8.95□□□□□ -0.98
HDAC9-228ENST00000524023 PLXNB1O43157 2135 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 IGKV1D-37A0A075B6S9 117 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 TCRBV4S1A1TA0A5B7 111 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 PRRG2O14669 202 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 PYYP10082 97 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 SUB1P53999 127 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC9-228ENST00000524023 SLC35B1P78383 322 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 LRRC10Q5BKY1 277 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 TPTE2P1Q5T6R2 138 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 C10orf113Q5VZT2 155 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 LINC00479Q96M42 142 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 PAXXQ9BUH6 204 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF355PQ9NSJ1 428 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 CBLN4Q9NTU7 201 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 PKDREJQ9NTG1 2253 aa8.94□□□□□ -0.98
HDAC9-228ENST00000524023 IGHV3-48P01763 117 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 THAP8Q8NA92 274 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 SAMD10Q9BYL1 202 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 SERTAD4Q9NUC0 356 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 CTSZQ9UBR2 303 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 RIF1Q5UIP0 2472 aaKnown RBP8.93□□□□□ -0.98
HDAC9-228ENST00000524023 FSTL3O95633 263 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 AMY1AP04745 511 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 LOXP28300 417 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-228ENST00000524023 CDKN1AP38936 164 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 TDGF1P3P51864 188 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF137PP52743 207 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 DLX6P56179 175 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 BPIFB3P59826 476 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 KIAA1644Q3SXP7 199 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 OR10J3Q5JRS4 329 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 MRPL54Q6P161 138 aaKnown RBP8.93□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF329Q86UD4 541 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 TGIF2LXQ8IUE1 241 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
HDAC9-228ENST00000524023 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
HDAC9-228ENST00000524023 AMMECR1Q9Y4X0 333 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-228ENST00000524023 PIEZO2Q9H5I5 2752 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 A0A1W2PPI3 338 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 SLC25A17O43808 307 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 MRGPRG-AS1Q2M3A8 158 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 VMA21Q3ZAQ7 101 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 ASCL5Q7RTU5 278 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 FAM168AQ92567 244 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 RITA1Q96K30 269 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 JKAMPQ9P055 326 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 ACACAQ13085 2346 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 IZUMO1RA6ND01 250 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 PEX7O00628 323 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 CA1P00915 261 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-228ENST00000524023 HLA-DQA1P01909 254 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 REG1AP05451 166 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 GPX1P07203 203 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 BRS3P32247 399 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms