RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 APOC4P55056 127 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 TOMM20LQ6UXN7 152 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 ZNF600Q6ZNG1 722 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 MCUBQ9NWR8 336 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 KCNIP3Q9Y2W7 256 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 CD5P06127 495 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 HTR2BP41595 481 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 IL22RA2Q969J5 263 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 CACFD1Q9UGQ2 172 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 PUS1Q9Y606 427 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLN8-206ENST00000523237 TMEM56-RWDD3S4R434 201 aa12.06□□□□□ -0.48
CLN8-206ENST00000523237 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
CLN8-206ENST00000523237 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
CLN8-206ENST00000523237 CLN5O75503 358 aa12.05□□□□□ -0.48
CLN8-206ENST00000523237 FAUP35544 74 aaKnown RBP12.05□□□□□ -0.48
CLN8-206ENST00000523237 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
CLN8-206ENST00000523237 OR4X1Q8NH49 305 aa12.05□□□□□ -0.48
CLN8-206ENST00000523237 OVOL2Q9BRP0 275 aa12.05□□□□□ -0.48
CLN8-206ENST00000523237 FNDC4Q9H6D8 234 aaPredicted RBP12.05□□□□□ -0.48
CLN8-206ENST00000523237 ZFAND3Q9H8U3 227 aa12.05□□□□□ -0.48
CLN8-206ENST00000523237 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
CLN8-206ENST00000523237 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 RPS10-NUDT3A0A1W2PQS6 291 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 CCDC160A6NGH7 325 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 CEBPZOSA8MTT3 80 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 UBE2CO00762 179 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 TFPI2P48307 235 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 PAFAH1B2P68402 229 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 TMEM187Q14656 261 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 FAM90A2PQ658T7 463 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 Q6ZWC4 215 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 TMEM230Q96A57 120 aa12.04□□□□□ -0.48
CLN8-206ENST00000523237 TRAV30A0A087WSZ9 112 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 KIR2DL5BA0A0G2JN68 375 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 KIR2DL5BA0A0G2JPC4 375 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 LCE6AA0A183 80 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 A0A1B0GU03 582 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 AKR1C4P17516 323 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 AP3S2P59780 193 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 MLANAQ16655 118 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 PYDC2Q56P42 97 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 TCF24Q7RTU0 167 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 KIR2DL5AQ8N109 375 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 STPG3Q8N7X2 389 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 KIR2DL5BQ8NHK3 375 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 ST8SIA2Q92186 375 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
CLN8-206ENST00000523237 TP53TG1Q9Y2A0 90 aa12.03□□□□□ -0.48
CLN8-206ENST00000523237 CSMD3Q7Z407 3707 aa12.02□□□□□ -0.48
CLN8-206ENST00000523237 TENM2Q9NT68 2774 aa12.02□□□□□ -0.48
CLN8-206ENST00000523237 A0A0B4J2A0 478 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 APOHP02749 345 aaPredicted RBP12.02□□□□□ -0.49
CLN8-206ENST00000523237 ANXA3P12429 323 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 NPPCP23582 126 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 S100A5P33763 92 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 SRPXP78539 464 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 APRG1Q8IVJ8 170 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 TOMM5Q8N4H5 51 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 RNASEH2CQ8TDP1 164 aaKnown RBP12.02□□□□□ -0.49
CLN8-206ENST00000523237 TMEM231Q9H6L2 316 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 SHPKQ9UHJ6 478 aa12.02□□□□□ -0.49
CLN8-206ENST00000523237 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 SPRY2O43597 315 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 NXPH3O95157 252 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 SLC25A4P12235 298 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
CLN8-206ENST00000523237 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
CLN8-206ENST00000523237 SUPT4H1P63272 117 aaKnown RBP12.01□□□□□ -0.49
CLN8-206ENST00000523237 KLF9Q13886 244 aaPredicted RBP12.01□□□□□ -0.49
CLN8-206ENST00000523237 DEFB135Q30KP9 77 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 NOXA1Q86UR1 476 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 LGI3Q8N145 548 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 TRIM63Q969Q1 353 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 METTL26Q96S19 204 aa12.01□□□□□ -0.49
CLN8-206ENST00000523237 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
CLN8-206ENST00000523237 A0A1W2PS18 150 aa12□□□□□ -0.49
CLN8-206ENST00000523237 DNASE2O00115 360 aaPredicted RBP12□□□□□ -0.49
CLN8-206ENST00000523237 DFFBO76075 338 aa12□□□□□ -0.49
CLN8-206ENST00000523237 IGKV1-17P01599 117 aa12□□□□□ -0.49
CLN8-206ENST00000523237 NPY1RP25929 384 aa12□□□□□ -0.49
CLN8-206ENST00000523237 CCR6P51684 374 aa12□□□□□ -0.49
CLN8-206ENST00000523237 SMCO1Q147U7 214 aa12□□□□□ -0.49
CLN8-206ENST00000523237 ETFRF1Q6IPR1 90 aa12□□□□□ -0.49
CLN8-206ENST00000523237 NARS2Q96I59 477 aaKnown RBP12□□□□□ -0.49
CLN8-206ENST00000523237 MS4A6AQ9H2W1 248 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms