RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TIGITQ495A1 244 aa11.23□□□□□ -0.61
MRPS28-209ENST00000522987 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
MRPS28-209ENST00000522987 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
MRPS28-209ENST00000522987 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
MRPS28-209ENST00000522987 KLK11Q9UBX7 282 aa11.23□□□□□ -0.61
MRPS28-209ENST00000522987 CD3DP04234 171 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 C4BPBP20851 252 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 NPPCP23582 126 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 OPRK1P41145 380 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 P2RY1P47900 373 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 RNASE10Q5GAN6 216 aaKnown RBP11.22□□□□□ -0.61
MRPS28-209ENST00000522987 Q8NAQ8 132 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 OR4D10Q8NGI6 311 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 TMEM230Q96A57 120 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 FUNDC2Q9BWH2 189 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
MRPS28-209ENST00000522987 VPS13DQ5THJ4 4388 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 A0A087WXM4 84 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 K7EQG2 157 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 NXPH3O95157 252 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 GIG44P09565 113 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-209ENST00000522987 P0C879 139 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 ZNF767PQ75MW2 155 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 APLNQ9ULZ1 77 aa11.21□□□□□ -0.61
MRPS28-209ENST00000522987 CLN5O75503 358 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 RND3P61587 244 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 SCGB2B2Q4G0G5 96 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 ACTL10Q5JWF8 245 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
MRPS28-209ENST00000522987 METTL26Q96S19 204 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 COPZ2Q9P299 210 aa11.2□□□□□ -0.62
MRPS28-209ENST00000522987 CD5P06127 495 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 SUB1P53999 127 aaKnown RBP eCLIP11.19□□□□□ -0.62
MRPS28-209ENST00000522987 FAAP20Q6NZ36 180 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 Q6ZRM9 215 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 Q6ZTC4 211 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 LHFPL1Q86WI0 220 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 OR13C8Q8NGS7 320 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 MARCH1Q8TCQ1 289 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 NAA50Q9GZZ1 169 aaKnown RBP11.19□□□□□ -0.62
MRPS28-209ENST00000522987 HERC2O95714 4834 aa11.19□□□□□ -0.62
MRPS28-209ENST00000522987 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-209ENST00000522987 A0A1W2PS18 150 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 IGKV1-17P01599 117 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 DHRS2Q13268 280 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
MRPS28-209ENST00000522987 EXTL2Q9UBQ6 330 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 CELA1Q9UNI1 258 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 X6R8D5 127 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 DNAH6Q9C0G6 4158 aa11.18□□□□□ -0.62
MRPS28-209ENST00000522987 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 CORTO00230 105 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 TNFAIP8O95379 198 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 CRYBB3P26998 211 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 RND2P52198 227 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 MEF2DQ14814 521 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 GSG1LQ6UXU4 331 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 CCDC71LQ8N9Z2 235 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 OR4X1Q8NH49 305 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 DCANP1Q8TF63 244 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 ZNF486Q96H40 463 aaPredicted RBP11.17□□□□□ -0.62
MRPS28-209ENST00000522987 NARS2Q96I59 477 aaKnown RBP11.17□□□□□ -0.62
MRPS28-209ENST00000522987 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
MRPS28-209ENST00000522987 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 ATG12O94817 140 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 UCP1P25874 307 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 RORCP51449 518 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 MZT2AQ6P582 158 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 ABHD1Q96SE0 405 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 HEYLQ9NQ87 328 aaPredicted RBP11.16□□□□□ -0.62
MRPS28-209ENST00000522987 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
MRPS28-209ENST00000522987 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 RAB3DO95716 219 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 SPP1P10451 314 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 MIFP14174 115 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 DEFB1P60022 68 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 DHODHQ02127 395 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 MORN3Q6PF18 240 aaPredicted RBP11.15□□□□□ -0.62
MRPS28-209ENST00000522987 ARRDC1Q8N5I2 433 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 TERB2Q8NHR7 220 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 GRAMD2BQ96HH9 432 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 PRR13Q9NZ81 148 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 MTFP1Q9UDX5 166 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
MRPS28-209ENST00000522987 TRAV10A0A0B4J240 114 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
MRPS28-209ENST00000522987 HELTA6NFD8 242 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 CEBPZOSA8MTT3 80 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms