RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 CACNG5Q9UF02 275 aa16.04■□□□□ 0.16
HOXA3-206ENST00000522788 CORTO00230 105 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 TMEM50AO95807 157 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 NPBWR1P48145 328 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 SUB1P53999 127 aaKnown RBP eCLIP16.03■□□□□ 0.16
HOXA3-206ENST00000522788 TOMM20LQ6UXN7 152 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 TMEM116Q8NCL8 245 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 GGTLC1Q9BX51 225 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 ENY2Q9NPA8 101 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 MCUBQ9NWR8 336 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 UBQLN2Q9UHD9 624 aa16.03■□□□□ 0.16
HOXA3-206ENST00000522788 LOC102724200A0A096LPH7 203 aaPredicted RBP16.02■□□□□ 0.16
HOXA3-206ENST00000522788 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
HOXA3-206ENST00000522788 SUPT4H1P63272 117 aaKnown RBP16.02■□□□□ 0.16
HOXA3-206ENST00000522788 ZNF79Q15937 498 aa16.02■□□□□ 0.16
HOXA3-206ENST00000522788 ODF3L2Q3SX64 289 aa16.02■□□□□ 0.16
HOXA3-206ENST00000522788 FAM90A2PQ658T7 463 aa16.02■□□□□ 0.16
HOXA3-206ENST00000522788 IL22RA2Q969J5 263 aa16.02■□□□□ 0.16
HOXA3-206ENST00000522788 SCGB3A2Q96PL1 93 aa16.02■□□□□ 0.16
HOXA3-206ENST00000522788 CSMD3Q7Z407 3707 aa16.01■□□□□ 0.15
HOXA3-206ENST00000522788 TRAV14DV4A0A0A6YYC5 116 aa16.01■□□□□ 0.15
HOXA3-206ENST00000522788 ZFAND6Q6FIF0 208 aa16.01■□□□□ 0.15
HOXA3-206ENST00000522788 ZFAND3Q9H8U3 227 aa16.01■□□□□ 0.15
HOXA3-206ENST00000522788 KCNIP3Q9Y2W7 256 aa16.01■□□□□ 0.15
HOXA3-206ENST00000522788 A0A1B0GU03 582 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 CCDC160A6NGH7 325 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 PYDC2Q56P42 97 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 ZNF600Q6ZNG1 722 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 CCDC190Q86UF4 302 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 OR4X1Q8NH49 305 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 TMEM170AQ8WVE7 144 aa16■□□□□ 0.15
HOXA3-206ENST00000522788 PUS1Q9Y606 427 aaKnown RBP eCLIP16■□□□□ 0.15
HOXA3-206ENST00000522788 IGHV3OR16-13A0A075B7E8 117 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 IGHV3-74A0A0B4J1X5 117 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 OR4C46A6NHA9 309 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 CLN5O75503 358 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 APOHP02749 345 aaPredicted RBP15.99■□□□□ 0.15
HOXA3-206ENST00000522788 AKR1C4P17516 323 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 OPRK1P41145 380 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 HTR2BP41595 481 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 LILRB2Q8N423 598 aa15.99■□□□□ 0.15
HOXA3-206ENST00000522788 C2orf83Q53S99 150 aa15.98■□□□□ 0.15
HOXA3-206ENST00000522788 NMSQ5H8A3 153 aa15.98■□□□□ 0.15
HOXA3-206ENST00000522788 LYZL2Q7Z4W2 148 aa15.98■□□□□ 0.15
HOXA3-206ENST00000522788 OVOL2Q9BRP0 275 aa15.98■□□□□ 0.15
HOXA3-206ENST00000522788 GINS3Q9BRX5 216 aa15.98■□□□□ 0.15
HOXA3-206ENST00000522788 VSIRQ9H7M9 311 aa15.98■□□□□ 0.15
HOXA3-206ENST00000522788 PLECQ15149 4684 aaKnown RBP15.97■□□□□ 0.15
HOXA3-206ENST00000522788 A0A0B4J2A0 478 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 NXPH3O95157 252 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 SULT1A3P0DMM9 295 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 SULT1A4P0DMN0 295 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 TOMM5Q8N4H5 51 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 ST8SIA2Q92186 375 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 HEYLQ9NQ87 328 aaPredicted RBP15.97■□□□□ 0.15
HOXA3-206ENST00000522788 SHPKQ9UHJ6 478 aa15.97■□□□□ 0.15
HOXA3-206ENST00000522788 CEBPZOSA8MTT3 80 aa15.96■□□□□ 0.15
HOXA3-206ENST00000522788 ZNF701M0R085 212 aaPredicted RBP15.96■□□□□ 0.15
HOXA3-206ENST00000522788 IGKV1-17P01599 117 aa15.96■□□□□ 0.15
HOXA3-206ENST00000522788 S100A5P33763 92 aa15.96■□□□□ 0.15
HOXA3-206ENST00000522788 FAUP35544 74 aaKnown RBP15.96■□□□□ 0.15
HOXA3-206ENST00000522788 SLC24A4Q8NFF2 622 aa15.96■□□□□ 0.15
HOXA3-206ENST00000522788 DNAH1Q9P2D7 4330 aa15.96■□□□□ 0.15
HOXA3-206ENST00000522788 LYSTQ99698 3801 aa15.96■□□□□ 0.14
HOXA3-206ENST00000522788 IGKV3-7A0A075B6H7 116 aa15.95■□□□□ 0.14
HOXA3-206ENST00000522788 CCR6P51684 374 aa15.95■□□□□ 0.14
HOXA3-206ENST00000522788 AP3S2P59780 193 aa15.95■□□□□ 0.14
HOXA3-206ENST00000522788 PRSS54Q6PEW0 395 aa15.95■□□□□ 0.14
HOXA3-206ENST00000522788 TCF24Q7RTU0 167 aa15.95■□□□□ 0.14
HOXA3-206ENST00000522788 RNASEH2CQ8TDP1 164 aaKnown RBP15.95■□□□□ 0.14
HOXA3-206ENST00000522788 IGHV3-66A0A0C4DH42 116 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 RPS10-NUDT3A0A1W2PQS6 291 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 TFPI2P48307 235 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 TIGITQ495A1 244 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 APRG1Q8IVJ8 170 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 LGI3Q8N145 548 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 HSPB7Q9UBY9 170 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 CACFD1Q9UGQ2 172 aa15.94■□□□□ 0.14
HOXA3-206ENST00000522788 IGLC1P0CG04 106 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 ANXA3P12429 323 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 TNFRSF9Q07011 255 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 SMCO1Q147U7 214 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 ZNF124Q15973 351 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 TMED4Q7Z7H5 227 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 GBGT1Q8N5D6 347 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 DEDD2Q8WXF8 326 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 SRRQ9GZT4 340 aa15.93■□□□□ 0.14
HOXA3-206ENST00000522788 TRAV30A0A087WSZ9 112 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 DFFBO76075 338 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 NPY1RP25929 384 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 APOC4P55056 127 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 SRPXP78539 464 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 TMEM128Q5BJH2 165 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 SLC25A21Q9BQT8 299 aaPredicted RBP15.92■□□□□ 0.14
HOXA3-206ENST00000522788 MAP6D1Q9H9H5 199 aa15.92■□□□□ 0.14
HOXA3-206ENST00000522788 KIR2DL5BA0A0G2JN68 375 aa15.91■□□□□ 0.14
HOXA3-206ENST00000522788 KIR2DL5BA0A0G2JPC4 375 aa15.91■□□□□ 0.14
HOXA3-206ENST00000522788 PITX3O75364 302 aa15.91■□□□□ 0.14
HOXA3-206ENST00000522788 CD5P06127 495 aa15.91■□□□□ 0.14
HOXA3-206ENST00000522788 SLC25A4P12235 298 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms