RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SELENOHQ8IZQ5 122 aaKnown RBP15.3■□□□□ 0.04
SDCBP-209ENST00000522243 LILRB2Q8N423 598 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 GALNT14Q96FL9 552 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 C6orf62Q9GZU0 229 aaPredicted RBP15.3■□□□□ 0.04
SDCBP-209ENST00000522243 CCDC59Q9P031 241 aaKnown RBP15.3■□□□□ 0.04
SDCBP-209ENST00000522243 GPR132Q9UNW8 380 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 SACSQ9NZJ4 4579 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 CORTO00230 105 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 UBE2CO00762 179 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 BMI1P35226 326 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 EWSR1Q01844 656 aaKnown RBP eCLIP15.29■□□□□ 0.04
SDCBP-209ENST00000522243 PMS2P11Q13670 270 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 TMEM268Q5VZI3 342 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 LYG2Q86SG7 212 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 OR51S1Q8NGJ8 323 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 RBPMSQ93062 196 aaKnown RBP15.29■□□□□ 0.04
SDCBP-209ENST00000522243 GPR146Q96CH1 333 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 MAP6D1Q9H9H5 199 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 TP53TG1Q9Y2A0 90 aa15.29■□□□□ 0.04
SDCBP-209ENST00000522243 KIR2DL5BA0A0G2JN68 375 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 KIR2DL5BA0A0G2JPC4 375 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 CTDSPLO15194 276 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 TMBIM6P55061 237 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 SPCS3P61009 180 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 DHODHQ02127 395 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 SURF2Q15527 256 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-209ENST00000522243 FAM219AQ8IW50 185 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 KIR2DL5AQ8N109 375 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 KIR2DL5BQ8NHK3 375 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 RNF183Q96D59 192 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 VSIRQ9H7M9 311 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-209ENST00000522243 PRR13Q9NZ81 148 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 CACNG5Q9UF02 275 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 RYR2Q92736 4967 aa15.28■□□□□ 0.04
SDCBP-209ENST00000522243 CRYM-AS1A6NIL9 109 aa15.27■□□□□ 0.04
SDCBP-209ENST00000522243 CLN5O75503 358 aa15.27■□□□□ 0.04
SDCBP-209ENST00000522243 DFFBO76075 338 aa15.27■□□□□ 0.04
SDCBP-209ENST00000522243 NXPH3O95157 252 aa15.27■□□□□ 0.04
SDCBP-209ENST00000522243 PAFAH1B2P68402 229 aa15.27■□□□□ 0.04
SDCBP-209ENST00000522243 CXorf65A6NEN9 183 aa15.26■□□□□ 0.03
SDCBP-209ENST00000522243 CMC4P56277 68 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-209ENST00000522243 RPL11P62913 178 aaKnown RBP15.26■□□□□ 0.03
SDCBP-209ENST00000522243 BSXQ3C1V8 233 aa15.26■□□□□ 0.03
SDCBP-209ENST00000522243 OR4X1Q8NH49 305 aa15.26■□□□□ 0.03
SDCBP-209ENST00000522243 OR52E5Q8NH55 327 aa15.26■□□□□ 0.03
SDCBP-209ENST00000522243 PRRT1Q99946 306 aa15.26■□□□□ 0.03
SDCBP-209ENST00000522243 HEYLQ9NQ87 328 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-209ENST00000522243 RABL2AQ9UBK7 228 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-209ENST00000522243 RABL2BQ9UNT1 228 aa15.26■□□□□ 0.03
SDCBP-209ENST00000522243 ANKRD20A5PA0PJZ0 165 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 CEBPZOSA8MTT3 80 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 DNASE2O00115 360 aaPredicted RBP15.25■□□□□ 0.03
SDCBP-209ENST00000522243 RPL5P46777 297 aaKnown RBP15.25■□□□□ 0.03
SDCBP-209ENST00000522243 TNFRSF9Q07011 255 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 TIGITQ495A1 244 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 AARDQ4LEZ3 155 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 TMEM230Q96A57 120 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 BCL7BQ9BQE9 202 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 SLIRPQ9GZT3 109 aaKnown RBP15.25■□□□□ 0.03
SDCBP-209ENST00000522243 MS4A6AQ9H2W1 248 aa15.25■□□□□ 0.03
SDCBP-209ENST00000522243 GSTZ1O43708 216 aaPredicted RBP15.24■□□□□ 0.03
SDCBP-209ENST00000522243 NOL3O60936 208 aaKnown RBP15.24■□□□□ 0.03
SDCBP-209ENST00000522243 NPPCP23582 126 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 TNFSF8P32971 234 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 HTR2BP41595 481 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 LEMD1Q68G75 181 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 FAM24BQ8N5W8 94 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 CSTL1Q9H114 145 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 MCUBQ9NWR8 336 aa15.24■□□□□ 0.03
SDCBP-209ENST00000522243 H3BMQ9 156 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 CD5P06127 495 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 DEFB131AP59861 70 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 TMEM187Q14656 261 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 METTL26Q96S19 204 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 TMEM231Q9H6L2 316 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 RSL24D1Q9UHA3 163 aaKnown RBP15.23■□□□□ 0.03
SDCBP-209ENST00000522243 RABAC1Q9UI14 185 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 SCP2D1Q9UJQ7 156 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 TMEM56-RWDD3S4R434 201 aa15.23■□□□□ 0.03
SDCBP-209ENST00000522243 RPS10-NUDT3A0A1W2PQS6 291 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 FABP12A6NFH5 140 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 MPTX1A8MV57 137 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 IGKV1-17P01599 117 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 C2orf83Q53S99 150 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 MCFD2Q8NI22 146 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 KCNIP3Q9Y2W7 256 aa15.22■□□□□ 0.03
SDCBP-209ENST00000522243 LYSTQ99698 3801 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 TRAV30A0A087WSZ9 112 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 A0A1W2PS18 150 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 SCGB2A1O75556 95 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 AKR1C4P17516 323 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 RND2P52198 227 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 PRSS54Q6PEW0 395 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 SOSTQ9BQB4 213 aa15.21■□□□□ 0.03
SDCBP-209ENST00000522243 SULT1A3P0DMM9 295 aa15.2■□□□□ 0.02
SDCBP-209ENST00000522243 SULT1A4P0DMN0 295 aa15.2■□□□□ 0.02
SDCBP-209ENST00000522243 CRYBB3P26998 211 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms