RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TEX45Q8NA69 505 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 PMCHL2Q9BQD1 86 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 AMBPP02760 352 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 PLP1P60201 277 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 LIME1Q9H400 295 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 A0A1W2PRE2 83 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 FAM90A2PQ658T7 463 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 PRDM13Q9H4Q3 707 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 MYO7BQ6PIF6 2116 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 LEMD1Q68G75 181 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 FAM57AQ8TBR7 257 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 HIST1H4GQ99525 98 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 OSTCQ9NRP0 149 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
SYNPO-205ENST00000522122 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 ATXN7O15265 892 aaPredicted RBP11.48□□□□□ -0.57
SYNPO-205ENST00000522122 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 EFNB3Q15768 340 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 FAM90A9PA6NNJ1 464 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 FMC1Q96HJ9 113 aa11.48□□□□□ -0.57
SYNPO-205ENST00000522122 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 LOC107984156A0A0G2JMH3 177 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 C7orf71A4D174 169 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 GPX1P07203 203 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 B3GALT5-AS1P59052 145 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 ARL17AQ8IVW1 177 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
SYNPO-205ENST00000522122 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 CD69Q07108 199 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 FOXF2Q12947 444 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 TEX38Q6PEX7 206 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 ERASQ7Z444 233 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 EEF1AKMT3Q96AZ1 226 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 SPRR3Q9UBC9 169 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 S4R3C0 116 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 ADMP35318 185 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 FAM106AQ4KMX7 169 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 F11RQ9Y624 299 aaKnown RBP11.47□□□□□ -0.57
SYNPO-205ENST00000522122 PSPNO60542 156 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 IGKV1-5P01602 117 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
SYNPO-205ENST00000522122 SSC4DQ8WTU2 575 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
SYNPO-205ENST00000522122 PRCDQ00LT1 54 aa11.46□□□□□ -0.57
SYNPO-205ENST00000522122 FAM53AQ6NSI3 398 aaPredicted RBP11.46□□□□□ -0.57
SYNPO-205ENST00000522122 Q9H3A6 140 aa11.46□□□□□ -0.57
SYNPO-205ENST00000522122 MIEN1Q9BRT3 115 aa11.46□□□□□ -0.57
SYNPO-205ENST00000522122 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.58
SYNPO-205ENST00000522122 TREML4Q6UXN2 200 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 TMEM14EPQ6UXP3 125 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 BMPERQ8N8U9 685 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 DENND4AQ7Z401 1863 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 A1L4Q6 167 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 DLX6P56179 175 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 CIARTQ8N365 385 aaPredicted RBP11.46□□□□□ -0.58
SYNPO-205ENST00000522122 THADAQ6YHU6 1953 aa11.46□□□□□ -0.58
SYNPO-205ENST00000522122 IGHV1-18A0A0C4DH31 117 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 SRRM5B3KS81 715 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 IGKV1D-33P01593 117 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 IGKV1-33P01594 117 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 AREGP15514 252 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 Q6AWC8 147 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 NPIPB6E9PJ23 425 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 C5orf24Q7Z6I8 188 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 ZNF407Q9C0G0 2248 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 COL6A6A6NMZ7 2263 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 FOXH1O75593 365 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 GGTLC1Q9BX51 225 aa11.45□□□□□ -0.58
SYNPO-205ENST00000522122 ABHD17AQ96GS6 310 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 A0A1B0GW15 77 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 TMEM105Q8N8V8 129 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 EPDR1Q9UM22 224 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 IL18BPO95998 194 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 PYYP10082 97 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
SYNPO-205ENST00000522122 C18orf15Q96N68 181 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 PEF1Q9UBV8 284 aaKnown RBP11.44□□□□□ -0.58
SYNPO-205ENST00000522122 NDUFS6O75380 124 aaKnown RBP11.44□□□□□ -0.58
SYNPO-205ENST00000522122 LY6EQ16553 131 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 RNFT1Q5M7Z0 435 aa11.44□□□□□ -0.58
SYNPO-205ENST00000522122 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
SYNPO-205ENST00000522122 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
SYNPO-205ENST00000522122 GNG5P63218 68 aa11.43□□□□□ -0.58
SYNPO-205ENST00000522122 OTORQ9NRC9 128 aa11.43□□□□□ -0.58
SYNPO-205ENST00000522122 DIDO1Q9BTC0 2240 aaKnown RBP11.43□□□□□ -0.58
SYNPO-205ENST00000522122 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
SYNPO-205ENST00000522122 OR11H12B2RN74 326 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms