RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TMEM50AO95807 157 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 CBLN1P23435 193 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 GPR183P32249 361 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 YPEL3P61236 119 aaPredicted RBP7.16□□□□□ -1.26
CLK4-209ENST00000521621 OR4D5Q8NGN0 318 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 DTD1Q8TEA8 209 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 RBKSQ9H477 322 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 DAZ1Q9NQZ3 744 aaKnown RBP7.16□□□□□ -1.26
CLK4-209ENST00000521621 NUPL2O15504 423 aaKnown RBP7.16□□□□□ -1.26
CLK4-209ENST00000521621 FOLR2P14207 255 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 SPNP16150 400 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 BMI1P35226 326 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 DEFA5Q01523 94 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 GGNBP1Q5YKI7 109 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 ZNF600Q6ZNG1 722 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 TMEM170AQ8WVE7 144 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
CLK4-209ENST00000521621 VAMP1P23763 118 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 NPY1RP25929 384 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 Q8N1Y9 231 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 OR1S1Q8NH92 325 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 HEYLQ9NQ87 328 aaPredicted RBP7.15□□□□□ -1.26
CLK4-209ENST00000521621 CEBPZOSA8MTT3 80 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 PRAF2O60831 178 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 IFNA21P01568 189 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.26
CLK4-209ENST00000521621 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
CLK4-209ENST00000521621 MISP3Q96FF7 219 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 CHRDL1Q9BU40 450 aa7.15□□□□□ -1.26
CLK4-209ENST00000521621 CD69Q07108 199 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 Q56UQ5 140 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 SMIM8Q96KF7 97 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 FNDC4Q9H6D8 234 aaPredicted RBP7.14□□□□□ -1.27
CLK4-209ENST00000521621 VSIRQ9H7M9 311 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 ZFAND3Q9H8U3 227 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 OR2T8A6NH00 312 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 ZNF785A8K8V0 405 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 SNRPGP15A8MWD9 76 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 SYNGR2O43760 224 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 GNG7O60262 68 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 GINS3Q9BRX5 216 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 IGHV7-4-1A0A0J9YVY3 117 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 TSPAN4O14817 238 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 CFDP00746 253 aaPredicted RBP7.14□□□□□ -1.27
CLK4-209ENST00000521621 H2AFB2P0C5Z0 115 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 RAB11AP62491 216 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 UNQ9165/PRO28630Q6UXU0 137 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 LINC00322Q6ZN03 302 aaPredicted RBP7.14□□□□□ -1.27
CLK4-209ENST00000521621 THAP8Q8NA92 274 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 SPAG8Q99932 426 aaPredicted RBP7.14□□□□□ -1.27
CLK4-209ENST00000521621 FLVCR2Q9UPI3 526 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 SMAD5-AS1Q9Y6J3 95 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 U3KQE9 123 aa7.14□□□□□ -1.27
CLK4-209ENST00000521621 TSC22D2O75157 780 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 IGLC1P0CG04 106 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 ANXA7P20073 488 aaKnown RBP7.13□□□□□ -1.27
CLK4-209ENST00000521621 NUP62P37198 522 aaPredicted RBP7.13□□□□□ -1.27
CLK4-209ENST00000521621 FAM90A2PQ658T7 463 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 RAB40CQ96S21 281 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 TMEM231Q9H6L2 316 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 MLXQ9UH92 298 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 TOMM40O96008 361 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 IGHV3-23P01764 117 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 DEFA1P59665 94 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 DEFA3P59666 94 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 IL15RAQ13261 267 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 C4orf46Q504U0 113 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 PRSS54Q6PEW0 395 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 DYNLRB2Q8TF09 96 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 MARVELD1Q9BSK0 173 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 SEPSECSQ9HD40 501 aaKnown RBP7.13□□□□□ -1.27
CLK4-209ENST00000521621 PRR13Q9NZ81 148 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 SLC45A2Q9UMX9 530 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 WNK1Q9H4A3 2382 aa7.13□□□□□ -1.27
CLK4-209ENST00000521621 FAM240BA0A1B0GVZ2 78 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 FABP1P07148 127 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 CRYBB3P26998 211 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 OPRK1P41145 380 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 CD300EQ496F6 205 aaPredicted RBP7.12□□□□□ -1.27
CLK4-209ENST00000521621 LAMTOR1Q6IAA8 161 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 ZBTB8BQ8NAP8 495 aaPredicted RBP7.12□□□□□ -1.27
CLK4-209ENST00000521621 UXS1Q8NBZ7 420 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 GGACTQ9BVM4 153 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 K7EPK0 472 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 IGKV1-17P01599 117 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 IFITM3Q01628 133 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 SPINK9Q5DT21 86 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 OR8G2PQ6IF36 304 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 TOMM20LQ6UXN7 152 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 SLC16A13Q7RTY0 426 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 GTSCR1Q86UQ5 136 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 PRR25Q96S07 402 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 TRGV9Q99603 122 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 C11orf1Q9H5F2 150 aa7.12□□□□□ -1.27
CLK4-209ENST00000521621 CHEK1O14757 476 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 NKX2-1P43699 371 aaPredicted RBP7.11□□□□□ -1.27
CLK4-209ENST00000521621 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 TMEM14EPQ6UXP3 125 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms