RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 CACNG5Q9UF02 275 aa16.04■□□□□ 0.16
HOXA3-204ENST00000521401 CORTO00230 105 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 TMEM50AO95807 157 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 NPBWR1P48145 328 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 SUB1P53999 127 aaKnown RBP eCLIP16.03■□□□□ 0.16
HOXA3-204ENST00000521401 TOMM20LQ6UXN7 152 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 TMEM116Q8NCL8 245 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 GGTLC1Q9BX51 225 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 ENY2Q9NPA8 101 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 MCUBQ9NWR8 336 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 UBQLN2Q9UHD9 624 aa16.03■□□□□ 0.16
HOXA3-204ENST00000521401 LOC102724200A0A096LPH7 203 aaPredicted RBP16.02■□□□□ 0.16
HOXA3-204ENST00000521401 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
HOXA3-204ENST00000521401 SUPT4H1P63272 117 aaKnown RBP16.02■□□□□ 0.16
HOXA3-204ENST00000521401 ZNF79Q15937 498 aa16.02■□□□□ 0.16
HOXA3-204ENST00000521401 ODF3L2Q3SX64 289 aa16.02■□□□□ 0.16
HOXA3-204ENST00000521401 FAM90A2PQ658T7 463 aa16.02■□□□□ 0.16
HOXA3-204ENST00000521401 IL22RA2Q969J5 263 aa16.02■□□□□ 0.16
HOXA3-204ENST00000521401 SCGB3A2Q96PL1 93 aa16.02■□□□□ 0.16
HOXA3-204ENST00000521401 CSMD3Q7Z407 3707 aa16.01■□□□□ 0.15
HOXA3-204ENST00000521401 TRAV14DV4A0A0A6YYC5 116 aa16.01■□□□□ 0.15
HOXA3-204ENST00000521401 ZFAND6Q6FIF0 208 aa16.01■□□□□ 0.15
HOXA3-204ENST00000521401 ZFAND3Q9H8U3 227 aa16.01■□□□□ 0.15
HOXA3-204ENST00000521401 KCNIP3Q9Y2W7 256 aa16.01■□□□□ 0.15
HOXA3-204ENST00000521401 A0A1B0GU03 582 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 CCDC160A6NGH7 325 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 PYDC2Q56P42 97 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 ZNF600Q6ZNG1 722 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 CCDC190Q86UF4 302 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 OR4X1Q8NH49 305 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 TMEM170AQ8WVE7 144 aa16■□□□□ 0.15
HOXA3-204ENST00000521401 PUS1Q9Y606 427 aaKnown RBP eCLIP16■□□□□ 0.15
HOXA3-204ENST00000521401 IGHV3OR16-13A0A075B7E8 117 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 IGHV3-74A0A0B4J1X5 117 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 OR4C46A6NHA9 309 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 CLN5O75503 358 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 APOHP02749 345 aaPredicted RBP15.99■□□□□ 0.15
HOXA3-204ENST00000521401 AKR1C4P17516 323 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 OPRK1P41145 380 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 HTR2BP41595 481 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 LILRB2Q8N423 598 aa15.99■□□□□ 0.15
HOXA3-204ENST00000521401 C2orf83Q53S99 150 aa15.98■□□□□ 0.15
HOXA3-204ENST00000521401 NMSQ5H8A3 153 aa15.98■□□□□ 0.15
HOXA3-204ENST00000521401 LYZL2Q7Z4W2 148 aa15.98■□□□□ 0.15
HOXA3-204ENST00000521401 OVOL2Q9BRP0 275 aa15.98■□□□□ 0.15
HOXA3-204ENST00000521401 GINS3Q9BRX5 216 aa15.98■□□□□ 0.15
HOXA3-204ENST00000521401 VSIRQ9H7M9 311 aa15.98■□□□□ 0.15
HOXA3-204ENST00000521401 PLECQ15149 4684 aaKnown RBP15.97■□□□□ 0.15
HOXA3-204ENST00000521401 A0A0B4J2A0 478 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 NXPH3O95157 252 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 SULT1A3P0DMM9 295 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 SULT1A4P0DMN0 295 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 TOMM5Q8N4H5 51 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 ST8SIA2Q92186 375 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 HEYLQ9NQ87 328 aaPredicted RBP15.97■□□□□ 0.15
HOXA3-204ENST00000521401 SHPKQ9UHJ6 478 aa15.97■□□□□ 0.15
HOXA3-204ENST00000521401 CEBPZOSA8MTT3 80 aa15.96■□□□□ 0.15
HOXA3-204ENST00000521401 ZNF701M0R085 212 aaPredicted RBP15.96■□□□□ 0.15
HOXA3-204ENST00000521401 IGKV1-17P01599 117 aa15.96■□□□□ 0.15
HOXA3-204ENST00000521401 S100A5P33763 92 aa15.96■□□□□ 0.15
HOXA3-204ENST00000521401 FAUP35544 74 aaKnown RBP15.96■□□□□ 0.15
HOXA3-204ENST00000521401 SLC24A4Q8NFF2 622 aa15.96■□□□□ 0.15
HOXA3-204ENST00000521401 DNAH1Q9P2D7 4330 aa15.96■□□□□ 0.15
HOXA3-204ENST00000521401 LYSTQ99698 3801 aa15.96■□□□□ 0.14
HOXA3-204ENST00000521401 IGKV3-7A0A075B6H7 116 aa15.95■□□□□ 0.14
HOXA3-204ENST00000521401 CCR6P51684 374 aa15.95■□□□□ 0.14
HOXA3-204ENST00000521401 AP3S2P59780 193 aa15.95■□□□□ 0.14
HOXA3-204ENST00000521401 PRSS54Q6PEW0 395 aa15.95■□□□□ 0.14
HOXA3-204ENST00000521401 TCF24Q7RTU0 167 aa15.95■□□□□ 0.14
HOXA3-204ENST00000521401 RNASEH2CQ8TDP1 164 aaKnown RBP15.95■□□□□ 0.14
HOXA3-204ENST00000521401 IGHV3-66A0A0C4DH42 116 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 RPS10-NUDT3A0A1W2PQS6 291 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 TFPI2P48307 235 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 TIGITQ495A1 244 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 APRG1Q8IVJ8 170 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 LGI3Q8N145 548 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 HSPB7Q9UBY9 170 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 CACFD1Q9UGQ2 172 aa15.94■□□□□ 0.14
HOXA3-204ENST00000521401 IGLC1P0CG04 106 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 ANXA3P12429 323 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 TNFRSF9Q07011 255 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 SMCO1Q147U7 214 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 ZNF124Q15973 351 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 TMED4Q7Z7H5 227 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 GBGT1Q8N5D6 347 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 DEDD2Q8WXF8 326 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 SRRQ9GZT4 340 aa15.93■□□□□ 0.14
HOXA3-204ENST00000521401 TRAV30A0A087WSZ9 112 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 DFFBO76075 338 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 NPY1RP25929 384 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 APOC4P55056 127 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 SRPXP78539 464 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 TMEM128Q5BJH2 165 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 SLC25A21Q9BQT8 299 aaPredicted RBP15.92■□□□□ 0.14
HOXA3-204ENST00000521401 MAP6D1Q9H9H5 199 aa15.92■□□□□ 0.14
HOXA3-204ENST00000521401 KIR2DL5BA0A0G2JN68 375 aa15.91■□□□□ 0.14
HOXA3-204ENST00000521401 KIR2DL5BA0A0G2JPC4 375 aa15.91■□□□□ 0.14
HOXA3-204ENST00000521401 PITX3O75364 302 aa15.91■□□□□ 0.14
HOXA3-204ENST00000521401 CD5P06127 495 aa15.91■□□□□ 0.14
HOXA3-204ENST00000521401 SLC25A4P12235 298 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms