RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 IGHV3OR16-13A0A075B7E8 117 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 IGHV3-74A0A0B4J1X5 117 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 A0A0B4J2A0 478 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 PIGBOS1A0A0B4J2F0 54 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 CTSGP08311 255 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 NPY1RP25929 384 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 SUPT4H1P63272 117 aaKnown RBP10.67□□□□□ -0.7
VEGFA-221ENST00000520265 BAK1Q16611 211 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 OR52E5Q8NH55 327 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 GINS3Q9BRX5 216 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 CACFD1Q9UGQ2 172 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 SHPKQ9UHJ6 478 aa10.67□□□□□ -0.7
VEGFA-221ENST00000520265 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 C15orf62A8K5M9 175 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 TFPI2P48307 235 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 PPP1R1AQ13522 171 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 TMEM116Q8NCL8 245 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 DEDD2Q8WXF8 326 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 RBKSQ9H477 322 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 UBQLN2Q9UHD9 624 aa10.66□□□□□ -0.7
VEGFA-221ENST00000520265 PUS1Q9Y606 427 aaKnown RBP eCLIP10.66□□□□□ -0.7
VEGFA-221ENST00000520265 IGHV3-66A0A0C4DH42 116 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 SFT2D2O95562 160 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 HOXB5P09067 269 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 BMI1P35226 326 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
VEGFA-221ENST00000520265 TNFRSF9Q07011 255 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 MLANAQ16655 118 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 ZNF600Q6ZNG1 722 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 NOXA1Q86UR1 476 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 DTD1Q8TEA8 209 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 ACY3Q96HD9 319 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 FNDC4Q9H6D8 234 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-221ENST00000520265 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
VEGFA-221ENST00000520265 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 TRAV14DV4A0A0A6YYC5 116 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 IGHV7-4-1A0A0J9YVY3 117 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 A0A1B0GU03 582 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 DUXBA0A1W2PPF3 345 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 K7EMT4 169 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 IFNA4P05014 189 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 C8orf88P0DMB2 117 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 IAPPP10997 89 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 IL7P13232 177 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 FCGR2BP31994 310 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-221ENST00000520265 RND2P52198 227 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 HAGHQ16775 308 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 C4orf46Q504U0 113 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 TOMM20LQ6UXN7 152 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-221ENST00000520265 SPATA25Q9BR10 227 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 FLVCR2Q9UPI3 526 aa10.64□□□□□ -0.71
VEGFA-221ENST00000520265 A8MZ25 164 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 CLN5O75503 358 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 NDUFB6O95139 128 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 TMEM50AO95807 157 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 TIGITQ495A1 244 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 AARDQ4LEZ3 155 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 C2orf83Q53S99 150 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 ETFRF1Q6IPR1 90 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 GBGT1Q8N5D6 347 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 RNASEH2CQ8TDP1 164 aaKnown RBP10.63□□□□□ -0.71
VEGFA-221ENST00000520265 NARS2Q96I59 477 aaKnown RBP10.63□□□□□ -0.71
VEGFA-221ENST00000520265 RNF2Q99496 336 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 RETNQ9HD89 108 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 MRPL36Q9P0J6 103 aaKnown RBP10.63□□□□□ -0.71
VEGFA-221ENST00000520265 HSPB7Q9UBY9 170 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
VEGFA-221ENST00000520265 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 CHEK1O14757 476 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 TSPAN4O14817 238 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 ANXA7P20073 488 aaKnown RBP10.62□□□□□ -0.71
VEGFA-221ENST00000520265 WFDC3Q8IUB2 231 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 OR4X1Q8NH49 305 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 COQ8AQ8NI60 647 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 METTL26Q96S19 204 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 SDHCQ99643 169 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-221ENST00000520265 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 TMED3Q9Y3Q3 217 aa10.62□□□□□ -0.71
VEGFA-221ENST00000520265 TRAV30A0A087WSZ9 112 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 C9orf170A2RU37 121 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
VEGFA-221ENST00000520265 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
VEGFA-221ENST00000520265 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-221ENST00000520265 WRBO00258 174 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
VEGFA-221ENST00000520265 SLC25A4P12235 298 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 OR10J1P30954 320 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 BSXQ3C1V8 233 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 TCF24Q7RTU0 167 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 OR1S2Q8NGQ3 325 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 ST8SIA2Q92186 375 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 NPIPB3Q92617 1050 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 SLC35E1Q96K37 410 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 OR10C1Q96KK4 312 aa10.61□□□□□ -0.71
VEGFA-221ENST00000520265 C7orf50Q9BRJ6 194 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms