RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 FCGR2BP31994 310 aaPredicted RBP13.78□□□□□ -0.2
SDC2-205ENST00000520233 MFAP4P55083 255 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 EWSR1Q01844 656 aaKnown RBP eCLIP13.78□□□□□ -0.2
SDC2-205ENST00000520233 HAPLN4Q86UW8 402 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 C3orf56Q8N813 242 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 ATP6V0BQ99437 205 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 MDFIQ99750 246 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 TXN2Q99757 166 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 S4R3C0 116 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 CST7O76096 145 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 IGHV3-48P01763 117 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 DLK1P80370 383 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 RUNX1Q01196 453 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 BAXQ07812 192 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 ARL16Q0P5N6 197 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 ACSM6Q6P461 480 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 SLC16A13Q7RTY0 426 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 ZNF546Q86UE3 836 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 CCDC140Q96MF4 163 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 OR5B12Q96R08 314 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 NEURL2Q9BR09 285 aa13.77□□□□□ -0.21
SDC2-205ENST00000520233 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
SDC2-205ENST00000520233 ADARB2-AS1A8MUL3 147 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 NUDT19A8MXV4 375 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 I3L521 148 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 IGHV3-23P01764 117 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 S100A11P31949 105 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
SDC2-205ENST00000520233 NPBWR1P48145 328 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 HBG1P69891 147 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 HBG2P69892 147 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 NHLH2Q02577 135 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 SHISA2Q6UWI4 295 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 C18orf65Q6ZTR6 163 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 TMEM116Q8NCL8 245 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 KLHL30-AS1Q8NEE0 82 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 OR4X1Q8NH49 305 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 SLC35E1Q96K37 410 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 AQP10Q96PS8 301 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 GGACTQ9BVM4 153 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 GAR1Q9NY12 217 aaKnown RBP13.76□□□□□ -0.21
SDC2-205ENST00000520233 TNFSF18Q9UNG2 199 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
SDC2-205ENST00000520233 A0A1W2PRX2 142 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 FNDC10F2Z333 226 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
SDC2-205ENST00000520233 SLC38A11Q08AI6 406 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 GAMTQ14353 236 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 ATP6V1FQ16864 119 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 Q56UQ5 140 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 CLEC19AQ6UXS0 136 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 ACOT7LQ6ZUV0 252 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
SDC2-205ENST00000520233 INO80EQ8NBZ0 244 aaPredicted RBP13.75□□□□□ -0.21
SDC2-205ENST00000520233 MRPL36Q9P0J6 103 aaKnown RBP13.75□□□□□ -0.21
SDC2-205ENST00000520233 PEF1Q9UBV8 284 aaKnown RBP13.75□□□□□ -0.21
SDC2-205ENST00000520233 ANKRD34BA5PLL1 514 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 HMSDA8MTL9 139 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 CLN5O75503 358 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 C1QBP02746 253 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 CLEC3BP05452 202 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 RND2P52198 227 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 CD300CQ08708 224 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 NSUN5P1Q3KNT7 163 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 UBAC2Q8NBM4 344 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 OR11H4Q8NGC9 324 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 ZC4H2Q9NQZ6 224 aa13.74□□□□□ -0.21
SDC2-205ENST00000520233 FBN1P35555 2871 aaKnown RBP13.73□□□□□ -0.21
SDC2-205ENST00000520233 GNG7O60262 68 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 HSPB1P04792 205 aaKnown RBP13.73□□□□□ -0.21
SDC2-205ENST00000520233 GPR183P32249 361 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 LILRB2Q8N423 598 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 OR1S2Q8NGQ3 325 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 OR5C1Q8NGR4 320 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 NPIPB3Q92617 1050 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 BSCL2Q96G97 398 aaPredicted RBP13.73□□□□□ -0.21
SDC2-205ENST00000520233 ACY3Q96HD9 319 aa13.73□□□□□ -0.21
SDC2-205ENST00000520233 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 RNF222A6NCQ9 220 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 OR2T8A6NH00 312 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 ARPC5O15511 151 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 TGOLN2O43493 480 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 TRBV12-3P01733 135 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 ARL3P36405 182 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 SPSB3Q6PJ21 355 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 TMEM147Q9BVK8 224 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 NPVFQ9HCQ7 196 aa13.72□□□□□ -0.21
SDC2-205ENST00000520233 SMCO3A2RU48 225 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 SCGB2A1O75556 95 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 CTSGP08311 255 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 AKR1C1Q04828 323 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 OR11H1Q8NG94 326 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 OR1N2Q8NGR9 330 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 UQCC1Q9NVA1 299 aa13.71□□□□□ -0.21
SDC2-205ENST00000520233 IGHV4OR15-8A0A075B7B6 117 aa13.7□□□□□ -0.22
SDC2-205ENST00000520233 A0A087WW49 117 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms