RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 IL17DQ8TAD2 202 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 OSR1Q8TAX0 266 aaPredicted RBP4.1□□□□□ -1.75
SDC2-204ENST00000519914 GATAD1Q8WUU5 269 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 DPF1Q92782 380 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 ZNF48Q96MX3 618 aaPredicted RBP4.1□□□□□ -1.75
SDC2-204ENST00000519914 OR5B12Q96R08 314 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 RNF2Q99496 336 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 ALKBH7Q9BT30 221 aaPredicted RBP4.1□□□□□ -1.75
SDC2-204ENST00000519914 LRFN3Q9BTN0 628 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
SDC2-204ENST00000519914 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 KAAG1Q9UBP8 84 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 CDC42EP3Q9UKI2 254 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 SLC45A2Q9UMX9 530 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 URGCP-MRPS24S4R325 110 aa4.1□□□□□ -1.75
SDC2-204ENST00000519914 TRAV38-1A0A0B4J264 116 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 A0A1W2PPV4 95 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 C17orf100A8MU93 164 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 ZNF705GA8MUZ8 300 aaPredicted RBP4.09□□□□□ -1.75
SDC2-204ENST00000519914 SPRY3O43610 288 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 RBMXL2O75526 392 aaKnown RBP4.09□□□□□ -1.75
SDC2-204ENST00000519914 MT-CO2P00403 227 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 OR5G3P0C626 314 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 OR10J4P0C629 311 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 IRF2P14316 349 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 GCHFRP30047 84 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 NBL1P41271 181 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 ATP5G3P48201 142 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 EDDM3BP56851 147 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 YPEL3P61236 119 aaPredicted RBP4.09□□□□□ -1.75
SDC2-204ENST00000519914 RHOBP62745 196 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 RAB31Q13636 194 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 EFNB3Q15768 340 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 TBR1Q16650 682 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 SPINK9Q5DT21 86 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 GCSAMLQ5JQS6 135 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 MIC13Q5XKP0 118 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 KCNIP4Q6PIL6 250 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 TMEM108Q6UXF1 575 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 ABHD12Q8N2K0 398 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 RPRMLQ8N4K4 120 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 C11orf42Q8N5U0 333 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 KLHDC1Q8N7A1 406 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 OR4C5Q8NGB2 326 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 OR2T10Q8NGZ9 312 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 OR1P1Q8NH06 330 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 CACNG8Q8WXS5 425 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 RPUSD4Q96CM3 377 aaKnown RBP4.09□□□□□ -1.75
SDC2-204ENST00000519914 CITED2Q99967 270 aaPredicted RBP4.09□□□□□ -1.75
SDC2-204ENST00000519914 ATG101Q9BSB4 218 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 ENY2Q9NPA8 101 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 HEYLQ9NQ87 328 aaPredicted RBP4.09□□□□□ -1.75
SDC2-204ENST00000519914 NDUFA4L2Q9NRX3 87 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 TMEM167BQ9NRX6 74 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 SLC35D1Q9NTN3 355 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 OR51B2Q9Y5P1 312 aa4.09□□□□□ -1.75
SDC2-204ENST00000519914 ZGRF1Q86YA3 2104 aa4.09□□□□□ -1.76
SDC2-204ENST00000519914 BDP1A6H8Y1 2624 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 TRBV20OR9-2A0A075B6H5 130 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 TEX50A0A1B0GTY4 177 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 PSMB11A5LHX3 300 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 DPRXA6NFQ7 191 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 FAM90A27PA6NNH2 459 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 SRRM4A7MD48 611 aaKnown RBP4.08□□□□□ -1.76
SDC2-204ENST00000519914 H0YJW9 148 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 C16orf97H3BN30 126 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 TMEM178BH3BS89 294 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 CA2P00918 260 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 SNRPCP09234 159 aaKnown RBP4.08□□□□□ -1.76
SDC2-204ENST00000519914 ARL14EPLP0DKL9 152 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 RNASE2P10153 161 aaKnown RBP4.08□□□□□ -1.76
SDC2-204ENST00000519914 ESDP10768 282 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 IL3RAP26951 378 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 CHRNB4P30926 498 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 DLX6P56179 175 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 PAFAH1B2P68402 229 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 CD69Q07108 199 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 FAM27E3Q08E93 113 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 ADIPOQQ15848 244 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 LTC4SQ16873 150 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 FAM201AQ5SY85 155 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 UTF1Q5T230 341 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 TEX38Q6PEX7 206 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 DUX4L9Q6RFH8 374 aaPredicted RBP4.08□□□□□ -1.76
SDC2-204ENST00000519914 PRSS57Q6UWY2 283 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 ZNF705AQ6ZN79 300 aaPredicted RBP4.08□□□□□ -1.76
SDC2-204ENST00000519914 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 ASCL5Q7RTU5 278 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 PDPNQ86YL7 162 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 DOLPP1Q86YN1 238 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 VKORC1L1Q8N0U8 176 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 LYG1Q8N1E2 194 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 THAP8Q8NA92 274 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 TMEM167AQ8TBQ9 72 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 TMEM190Q8WZ59 177 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 ST6GALNAC6Q969X2 333 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 SFRP2Q96HF1 295 aa4.08□□□□□ -1.76
SDC2-204ENST00000519914 ZNF714Q96N38 554 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms