RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 CHRDL1Q9BU40 450 aa9.05□□□□□ -0.96
HPS4-218ENST00000519774 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
HPS4-218ENST00000519774 GPN1Q9HCN4 374 aaPredicted RBP9.05□□□□□ -0.96
HPS4-218ENST00000519774 GSKIPQ9P0R6 139 aa9.05□□□□□ -0.96
HPS4-218ENST00000519774 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
HPS4-218ENST00000519774 RPS10-NUDT3A0A1W2PQS6 291 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 ZNF320A2RRD8 509 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 C5orf51A6NDU8 294 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 A6NJY4 79 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 SYNGR2O43760 224 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 PRAF2O60831 178 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 NKX2-1P43699 371 aaPredicted RBP9.04□□□□□ -0.96
HPS4-218ENST00000519774 NPBWR1P48145 328 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 INSL3P51460 131 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 POLR2GP62487 172 aaKnown RBP eCLIP9.04□□□□□ -0.96
HPS4-218ENST00000519774 FAM106AQ4KMX7 169 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 SPSB3Q6PJ21 355 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 NOXA1Q86UR1 476 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 TMEM170AQ8WVE7 144 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 GAR1Q9NY12 217 aaKnown RBP9.04□□□□□ -0.96
HPS4-218ENST00000519774 PEMTQ9UBM1 199 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 U3KQ87 197 aa9.04□□□□□ -0.96
HPS4-218ENST00000519774 H3BP45 60 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 NUPL2O15504 423 aaKnown RBP9.03□□□□□ -0.96
HPS4-218ENST00000519774 WIPF1O43516 503 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 SSSCA1O60232 199 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 IFNA4P05014 189 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
HPS4-218ENST00000519774 ADMP35318 185 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 MLANAQ16655 118 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 GPHB5Q86YW7 130 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
HPS4-218ENST00000519774 CIB3Q96Q77 187 aaPredicted RBP9.03□□□□□ -0.96
HPS4-218ENST00000519774 TXN2Q99757 166 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
HPS4-218ENST00000519774 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
HPS4-218ENST00000519774 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 LGALS9O00182 355 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 LY86O95711 162 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 PTTG1O95997 202 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 CSN3P07498 182 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 CTSGP08311 255 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 EDN2P20800 178 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 ID3Q02535 119 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 UNQ9165/PRO28630Q6UXU0 137 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 GSG1LQ6UXU4 331 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 DYNLRB2Q8TF09 96 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 C20orf24Q9BUV8 137 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 PALMDQ9NP74 551 aa9.02□□□□□ -0.97
HPS4-218ENST00000519774 AURKAIP1Q9NWT8 199 aaPredicted RBP9.02□□□□□ -0.97
HPS4-218ENST00000519774 TMEM213A2RRL7 107 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 SNRPGP15A8MWD9 76 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 A8MWP6 167 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 NDUFA4O00483 81 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 GOSR2O14653 212 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 CLN5O75503 358 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 YIF1AO95070 293 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 SLC25A4P12235 298 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 RND2P52198 227 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
HPS4-218ENST00000519774 RAB11AP62491 216 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 RPP30P78346 268 aaKnown RBP9.01□□□□□ -0.97
HPS4-218ENST00000519774 RELQ04864 619 aaPredicted RBP9.01□□□□□ -0.97
HPS4-218ENST00000519774 SPANXN5Q5MJ07 72 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 PRSS54Q6PEW0 395 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 OR4X1Q8NH49 305 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 TMEM190Q8WZ59 177 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 ACY3Q96HD9 319 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 C2orf50Q96LR7 162 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 PRR25Q96S07 402 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
HPS4-218ENST00000519774 PSENENQ9NZ42 101 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 RCL1Q9Y2P8 373 aaKnown RBP9.01□□□□□ -0.97
HPS4-218ENST00000519774 UFC1Q9Y3C8 167 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 LSM5Q9Y4Y9 91 aaKnown RBP9.01□□□□□ -0.97
HPS4-218ENST00000519774 SELENOKQ9Y6D0 94 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
HPS4-218ENST00000519774 ZNF207O43670 478 aaKnown RBP9□□□□□ -0.97
HPS4-218ENST00000519774 SSNA1O43805 119 aa9□□□□□ -0.97
HPS4-218ENST00000519774 SCGB2A1O75556 95 aa9□□□□□ -0.97
HPS4-218ENST00000519774 SIX6O95475 246 aa9□□□□□ -0.97
HPS4-218ENST00000519774 TMEM50AO95807 157 aa9□□□□□ -0.97
HPS4-218ENST00000519774 IGLV1-51P01701 117 aa9□□□□□ -0.97
HPS4-218ENST00000519774 MBPP02686 304 aaPredicted RBP9□□□□□ -0.97
HPS4-218ENST00000519774 FOLR2P14207 255 aa9□□□□□ -0.97
HPS4-218ENST00000519774 S100A10P60903 97 aa9□□□□□ -0.97
HPS4-218ENST00000519774 CD69Q07108 199 aa9□□□□□ -0.97
HPS4-218ENST00000519774 DCTN2Q13561 401 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms