RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 BRCA2P51587 3418 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 TRAV30A0A087WSZ9 112 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 TMED7-TICAM2A0A0A6YYA0 188 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 IGLV1-36A0A0B4J1U3 117 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 IGHV1-69DA0A0B4J2H0 117 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 A0A0J9YXV3 536 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF850A8MQ14 1090 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 BBIP1A8MTZ0 92 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 RBFOX2O43251 390 aaKnown RBP eCLIP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 CD5LO43866 347 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 COX7A2P2O60397 106 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 EPPINO95925 133 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 NCR2O95944 276 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 CSN2P05814 226 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 HIST1H1DP16402 221 aaKnown RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 RPL7P18124 248 aaKnown RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 IL1RNP18510 177 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 ATP6V0CP27449 155 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 GABRA3P34903 492 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 CCR2P41597 374 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 MP68P56378 58 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 CTBP2P56545 445 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 NDUFA6P56556 154 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 SYNJ2BPP57105 145 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 KRTAP10-1P60331 282 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 PPP1CAP62136 330 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 PRR3P79522 188 aaKnown RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 CDK6Q00534 326 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 LOXL1Q08397 574 aaPredicted RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 BTN1A1Q13410 526 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 PNOCQ13519 176 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 SPANXN3Q5MJ09 141 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 GLT8D1Q68CQ7 371 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 SBSNQ6UWP8 590 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 ATP5L2Q7Z4Y8 100 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 MDP1Q86V88 176 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 SGPP2Q8IWX5 399 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 ZFP41Q8N8Y5 198 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 OR52P1PQ8NH57 321 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 GNPNAT1Q96EK6 184 aaPredicted RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 KCNS1Q96KK3 526 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 MGLLQ99685 303 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 PRSS27Q9BQR3 290 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 PRADC1Q9BSG0 188 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 NDFIP1Q9BT67 221 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 GABARAPL3Q9BY60 117 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 DHCR7Q9UBM7 475 aaKnown RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 METTL1Q9UBP6 276 aaKnown RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 AK3Q9UIJ7 227 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 BCORQ6W2J9 1755 aa2.17□□□□□ -2.06
VPS13B-207ENST00000518569 IGHV3-66A0A0C4DH42 116 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 B4DEV8 164 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 C8orf87E5RJ46 101 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 UBE2L6O14933 153 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 DEDDO75618 318 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF682O95780 498 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 TRBV12-3P01733 135 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 FABP3P05413 133 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 GPX1P07203 203 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 PAEPP09466 180 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 AKAIN1P0CW23 69 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 CTSEP14091 401 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 RPS3P23396 243 aaKnown RBP eCLIP2.16□□□□□ -2.06
VPS13B-207ENST00000518569 CRHBPP24387 322 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 S100A2P29034 98 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 LPAR6P43657 344 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 NDUFA8P51970 172 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 MEF2CQ06413 473 aaPredicted RBP2.16□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF404Q494X3 552 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 ABCA11PQ4W5N1 156 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM236Q5W0B7 351 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 RASL11AQ6T310 242 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF709Q8N972 641 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 C11orf72Q8NBR9 251 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 OR4S1Q8NGB4 309 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 OR11G2Q8NGC1 345 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 OR10AD1Q8NGE0 317 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 OR2T27Q8NH04 317 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 CCL17Q92583 94 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 NEURL3Q96EH8 262 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 C2orf50Q96LR7 162 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 DERL3Q96Q80 235 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 OR2A5Q96R48 311 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 GINS4Q9BRT9 223 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 SLC25A2Q9BXI2 301 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 TCEAL2Q9H3H9 227 aaPredicted RBP2.16□□□□□ -2.06
VPS13B-207ENST00000518569 RPP21Q9H633 154 aaKnown RBP2.16□□□□□ -2.06
VPS13B-207ENST00000518569 CCDC167Q9P0B6 97 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 SLC23A2Q9UGH3 650 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 ALPK3Q96L96 1907 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 NFAT5O94916 1531 aa2.16□□□□□ -2.06
VPS13B-207ENST00000518569 KDM3BQ7LBC6 1761 aa2.15□□□□□ -2.06
VPS13B-207ENST00000518569 ADGRB1O14514 1584 aa2.15□□□□□ -2.06
VPS13B-207ENST00000518569 ZSWIM8A7E2V4 1837 aa2.15□□□□□ -2.06
VPS13B-207ENST00000518569 MYO9BQ13459 2157 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 TJP1Q07157 1748 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 NRXN2Q9P2S2 1712 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 TRAV9-1A0A075B6T8 112 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 TRAV19A0A0A6YYK7 116 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 TRAV4A0A0B4J268 109 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms