RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 FXYD6-FXYD2A0A087WZ82 144 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MFSD2BA6NFX1 497 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR2T8A6NH00 312 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 TGOLN2O43493 480 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DEDDO75618 318 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CCNKO75909 580 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MPC2O95563 127 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IFNA5P01569 189 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IGHV3-48P01763 117 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 S100A11P31949 105 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 P2RY1P47900 373 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SULT1A1P50225 295 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RND2P52198 227 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 AP2S1P53680 142 aaPredicted RBP4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 KRTAP10-3P60369 221 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RUNX1Q01196 453 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CD69Q07108 199 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ATP6V1FQ16864 119 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PRSS54Q6PEW0 395 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SLC16A13Q7RTY0 426 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZNF709Q8N972 641 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR1S2Q8NGQ3 325 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR2T35Q8NGX2 323 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SCGB1C1Q8TD33 95 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 Q8WTZ3 238 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 BSCL2Q96G97 398 aaPredicted RBP4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 FANCD2OSQ96PS1 177 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR4C12Q96R67 309 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 GINS3Q9BRX5 216 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MCRIP2Q9BUT9 160 aaKnown RBP4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PEMTQ9UBM1 199 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZMAT5Q9UDW3 170 aaKnown RBP4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 UFC1Q9Y3C8 167 aa4.23□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IGHV4OR15-8A0A075B7B6 117 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 A0A087WW49 117 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PPP5D1E7EU14 171 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 I3L2K1 104 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 I3L521 148 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 K7EIM0 57 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OVOL1O14753 267 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CLN5O75503 358 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CST7O76096 145 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR2C1O95371 312 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CXCL3P19876 107 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RPL12P30050 165 aaKnown RBP4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR10J1P30954 320 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 HOXD3P31249 432 aaPredicted RBP4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 H2BFSP57053 126 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DLK1P80370 383 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 BAXQ07812 192 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SLC38A11Q08AI6 406 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DEFB136Q30KP8 78 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 HIST2H2BDQ6DRA6 164 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 C11orf87Q6NUJ2 197 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZNF600Q6ZNG1 722 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 Q6ZNX1 250 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 C18orf65Q6ZTR6 163 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZNF546Q86UE3 836 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 AKAP14Q86UN6 197 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 C1QL4Q86Z23 238 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 TMEM217Q8N7C4 229 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR11H7Q8NGC8 314 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR4X1Q8NH49 305 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZNF502Q8TBZ5 544 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MYOZ3Q8TDC0 251 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DYNLRB2Q8TF09 96 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 WIPF2Q8TF74 440 aaPredicted RBP4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 NPIPB3Q92617 1050 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PPP1R14BQ96C90 147 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 WDR89Q96FK6 387 aaPredicted RBP4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RAX2Q96IS3 184 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DUX3Q96PT4 197 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 C20orf24Q9BUV8 137 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 GGACTQ9BVM4 153 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 NPVFQ9HCQ7 196 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 LYRM2Q9NU23 88 aaPredicted RBP4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MBD2Q9UBB5 411 aa4.22□□□□□ -1.73
SCARNA16.4-201ENST00000516956 COL6A5A8TX70 2615 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 BORCS7-ASMTA0A0B4J1R7 106 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGHV3-35A0A0C4DH35 117 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C15orf62A8K5M9 175 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SEC14L6B5MCN3 397 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 FNDC10F2Z333 226 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C17orf112F2Z3M2 114 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 NDUFA4O00483 81 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SAP30O75446 220 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 DFFBO76075 338 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TMEM50AO95807 157 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 CFDP00746 253 aaPredicted RBP4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 RD3LP0DJH9 198 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C4BPBP20851 252 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 FCGR2BP31994 310 aaPredicted RBP4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 EIF2B2P49770 351 aaKnown RBP4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SLURP1P55000 103 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 MFAP2P55001 183 aa4.21□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SYNJ2BPP57105 145 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms