RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 FOXL2P58012 376 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RPL30P62888 115 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 SEC11AP67812 179 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 HOXA4Q00056 320 aaPredicted RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 Q0VFX4 171 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RTP5Q14D33 572 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 MMDQ15546 238 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 C3AR1Q16581 482 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RSPO4Q2I0M5 234 aaPredicted RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TMEM177Q53S58 311 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TMEM97Q5BJF2 176 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 SPINK9Q5DT21 86 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 CENPWQ5EE01 88 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 CT83Q5H943 113 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 PRR27Q6MZM9 219 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 MRPL54Q6P161 138 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RNASEKQ6P5S7 137 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 DHRS13Q6UX07 377 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TEX43Q6ZNM6 134 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNF826PQ6ZT77 177 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 SLC25A48Q6ZT89 311 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 LINC00305Q7Z4B0 112 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 MOB3BQ86TA1 216 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 HAPLN4Q86UW8 402 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 ODF3L1Q8IXM7 274 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 C11orf53Q8IXP5 236 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZCCHC24Q8N2G6 241 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TMEM256Q8N2U0 113 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 LINC00311Q8N616 119 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 CD177Q8N6Q3 437 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TPRX1Q8N7U7 411 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 C5orf17Q8NAS9 161 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNRF1Q8ND25 227 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 DEFB108BQ8NET1 73 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 OR13A1Q8NGR1 328 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 OR1B1Q8NGR6 318 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 OR1N2Q8NGR9 330 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 UBALD1Q8TB05 177 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TMEM167AQ8TBQ9 72 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 BLNKQ8WV28 456 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 CCL17Q92583 94 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 NPIPB3Q92617 1050 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 C11orf52Q96A22 123 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 COQ2Q96H96 371 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RAX2Q96IS3 184 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 HARBI1Q96MB7 349 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TRGV9Q99603 122 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 CDX2Q99626 313 aaPredicted RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 MGST2Q99735 147 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RASL11BQ9BPW5 248 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 PIMREGQ9BSJ6 248 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TMEM208Q9BTX3 173 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 SNHG12Q9BXW3 62 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 SPRY4Q9C004 299 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RAB1BQ9H0U4 201 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RPP21Q9H633 154 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 GNB4Q9HAV0 340 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 DYNLRB1Q9NP97 96 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 ASCL3Q9NQ33 180 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNF71Q9NQZ8 489 aaPredicted RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 OTORQ9NRC9 128 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TNFRSF19Q9NS68 423 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 CBLN4Q9NTU7 201 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 AURKAIP1Q9NWT8 199 aaPredicted RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 TMEM160Q9NX00 188 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 C1RLQ9NZP8 487 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 PEF1Q9UBV8 284 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RPUSD1Q9UJJ7 312 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RALYQ9UKM9 306 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 HIGD1AQ9Y241 93 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 LSM4Q9Y4Z0 139 aaKnown RBP1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 RFNGQ9Y644 331 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 U3KQA8 63 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 V9GYV3 84 aa1.7□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGKV1D-17A0A075B6S4 117 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV2OR16-5A0A0B4J2B6 119 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV1-18A0A0C4DH31 117 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV1-69-2A0A0G2JMI3 117 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 A0A0G2JMM0 328 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 KIR2DL5BA0A0G2JN68 375 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 KIR2DL5BA0A0G2JPC4 375 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV3-64DA0A0J9YX35 117 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 A0A1W2PPB8 328 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 A0A1W2PRS3 328 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 MBD3L4A6NDZ8 208 aaPredicted RBP1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 MBD3L3A6NE82 208 aaPredicted RBP1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 OR4C46A6NHA9 309 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 MBD3L5A6NJ08 208 aaPredicted RBP1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNF785A8K8V0 405 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 C17orf100A8MU93 164 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 FABP5P3A8MUU1 101 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 HIGD1CA8MV81 97 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 KIR3DP1A8MWS1 328 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 PATE3B3GLJ2 98 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 F2Z2F3 143 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 C15orf65H3BRN8 121 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 WNT9BO14905 357 aa1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNF207O43670 478 aaKnown RBP1.69□□□□□ -2.14
RNU1-40P-201ENST00000516816 GNG7O60262 68 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms