RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 HIST2H2BEQ16778 126 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 C17orf58Q2M2W7 97 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 DEFB136Q30KP8 78 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 SCGB2B2Q4G0G5 96 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 PLAC9Q5JTB6 97 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 PVRIGQ6DKI7 326 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 CCDC144NLQ6NUI1 221 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF343Q6P1L6 599 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF880Q6PDB4 577 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 KCTD9Q7L273 389 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 VMO1Q7Z5L0 202 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 THNSL2Q86YJ6 484 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF695Q8IW36 515 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM185AQ8N0U4 392 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 ABHD12Q8N2K0 398 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM24BQ8N5W8 94 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM217Q8N7C4 229 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 UBAC2Q8NBM4 344 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 OR9G1Q8NH87 305 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 Q8WTZ3 238 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 HIST1H2BHQ93079 126 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM46BQ96A09 425 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 GALMQ96C23 342 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB3CQ96E17 227 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 COQ2Q96H96 371 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 RBM14Q96PK6 669 aaKnown RBP2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 HIST1H2BNQ99877 126 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 HIST1H2BMQ99879 126 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 SULT4A1Q9BR01 284 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 NICN1Q9BSH3 213 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 C20orf24Q9BUV8 137 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 CLEC7AQ9BXN2 247 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC25A31Q9H0C2 315 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 BANF2Q9H503 90 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 TAF9BQ9HBM6 251 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 PLEKHJ1Q9NW61 149 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 PPP1R14DQ9NXH3 145 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 CALYQ9NYX4 217 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 KCNIP1Q9NZI2 227 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 DOK5Q9P104 306 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 DPM3Q9P2X0 92 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 ONECUT1Q9UBC0 465 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 IL36RNQ9UBH0 155 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 JPT1Q9UK76 154 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 PITPNC1Q9UKF7 332 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 TRAPPC2LQ9UL33 140 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 GAB2Q9UQC2 676 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 TMED3Q9Y3Q3 217 aa2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 AMMECR1Q9Y4X0 333 aaPredicted RBP2.34□□□□□ -2.03
SCARNA13-201ENST00000516672 IGKV1D-8A0A087WSZ0 117 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 ELOA3CA0A087WX78 387 aaPredicted RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 IGHV2-26A0A0B4J1V2 119 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 C13orf42A0A1B0GVH6 325 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 A0A1W2PP11 408 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 CRYM-AS1A6NIL9 109 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 FAM90A9PA6NNJ1 464 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF727A8MUV8 499 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 A8MWP6 167 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 TRDCB7Z8K6 153 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 LY6LH3BQJ8 138 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 C15orf65H3BRN8 121 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 BUB1B-PAK6H3BSN5 160 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 J3QR06 171 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 K7EPK0 472 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 M0QZK8 103 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 SOCS1O15524 211 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 YPEL1O60688 119 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2C1O95371 312 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 IFNA17P01571 189 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 PMP2P02689 132 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 SNRPCP09234 159 aaKnown RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 SEC11BP0C7V7 166 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 FAM106CPP0CH98 169 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 HIST1H1DP16402 221 aaKnown RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 GNB3P16520 340 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 CCL3L1P16619 93 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 AKR1C4P17516 323 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 PI3P19957 117 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 VAMP1P23763 118 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 IL3RAP26951 378 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 RPL12P30050 165 aaKnown RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 BRS3P32247 399 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 P2RY1P47900 373 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 CEBPDP49716 269 aaPredicted RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 RAB7AP51149 207 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2B8PP59922 312 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 CD81P60033 236 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 NUTF2P61970 127 aaKnown RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 EIF5AP63241 154 aaKnown RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 CCL20P78556 96 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 HES1Q14469 280 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 EDDM3AQ14507 147 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 MSMO1Q15800 293 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 ACTBL2Q562R1 376 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM128Q5BJH2 165 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 COA6Q5JTJ3 125 aaKnown RBP2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF506Q5JVG8 444 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 FAM90A2PQ658T7 463 aa2.33□□□□□ -2.04
SCARNA13-201ENST00000516672 EIF5AL1Q6IS14 154 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms