RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, human

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-222	ENST00000515609	FAM223B	A6NKX1	122 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	SEC14L6	B5MCN3	397 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	IGHG2	P01859	326 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	FOSL1	P15407	271 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	CDC34	P49427	236 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	PSMB3	P49720	205 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	RND2	P52198	227 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	ELL	P55199	621 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	KLK9	Q2XQG4	91 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	CYP2G1P	Q6ZSU1	146 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	FAM223A	Q8IWN6	122 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	STXBP6	Q8NFX7	210 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	TMEM190	Q8WZ59	177 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	NPIPB3	Q92617	1050 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	MGST2	Q99735	147 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	MRPL32	Q9BYC8	188 aa	Known RBP	7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	PRSS22	Q9GZN4	317 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	RPRM	Q9NS64	109 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	TNFRSF19	Q9NS68	423 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	KLK9	Q9UKQ9	250 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	SLC45A2	Q9UMX9	530 aa		7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	PRRC2A	P48634	2157 aa	Known RBP	7.5	□□□□□ -1.21
TPM3-222	ENST00000515609	IGLV11-55	A0A075B6I3	123 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	TRBV7-1	A0A0A6YYK4	115 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609		A0A0G2JLM5	398 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	TMEM89	A2RUT3	159 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	ANKRD34B	A5PLL1	514 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	MAP1LC3B2	A6NCE7	125 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	MFSD2B	A6NFX1	497 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609		I3L2K1	104 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	ATP6V0E1	O15342	81 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	GNG7	O60262	68 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	NDUFS6	O75380	124 aa	Known RBP	7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	CLN5	O75503	358 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	CXorf1	O96002	111 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	PAX6	P26367	422 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	OR10J1	P30954	320 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	FCGR2B	P31994	310 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	RPL15	P61313	204 aa	Known RBP	7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	SLC35B1	P78383	322 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	SSBP2	P81877	361 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	PRR20E	P86478	221 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	PRR20C	P86479	221 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	PRR20D	P86480	221 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	PRR20B	P86481	221 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	PRR20A	P86496	221 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	LY6E	Q16553	131 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	C9orf152	Q5JTZ5	239 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	TMEM219	Q86XT9	240 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	STPG3	Q8N7X2	389 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	RCC1L	Q96I51	464 aa	Known RBP	7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	USMG5	Q96IX5	58 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	JMJD8	Q96S16	334 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	TXNDC17	Q9BRA2	123 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	MAP1LC3B	Q9GZQ8	125 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	EIF5A2	Q9GZV4	153 aa	Known RBP	7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	MANBAL	Q9NQG1	85 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	YAE1D1	Q9NRH1	226 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	ZNF355P	Q9NSJ1	428 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609	C21orf62	Q9NYP8	219 aa		7.49	□□□□□ -1.21
TPM3-222	ENST00000515609		I3L521	148 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	NUPL2	O15504	423 aa	Known RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	COX7A2P2	O60397	106 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	APELA	P0DMC3	54 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	YPEL3	P61236	119 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	ECSCR	Q19T08	205 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	MIC13	Q5XKP0	118 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	TET2	Q6N021	2002 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	SPSB3	Q6PJ21	355 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	PQLC2	Q6ZP29	291 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	RPP25L	Q8N5L8	163 aa	Known RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	OR5T1	Q8NG75	326 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	OR2T6	Q8NHC8	308 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609		Q8WTZ3	238 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	EEF1AKMT3	Q96AZ1	226 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	NARS2	Q96I59	477 aa	Known RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	FAM210A	Q96ND0	272 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	FAM103A1	Q9BTL3	118 aa	Known RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	DNAJC4	Q9NNZ3	241 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	TECR	Q9NZ01	308 aa	Known RBP	7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	FBXL7	Q9UJT9	491 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	CDC42EP3	Q9UKI2	254 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	TNC	P24821	2201 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	TENM4	Q6N022	2769 aa		7.48	□□□□□ -1.21
TPM3-222	ENST00000515609	IGHV4-59	P01825	116 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	LINC00869	P0C866	280 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	RD3L	P0DJH9	198 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	EGR2	P11161	476 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	ATP5G2	Q06055	141 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609		Q56UQ5	140 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	KHDC3L	Q587J8	217 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	C10orf113	Q5VZT2	155 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	FAM122C	Q6P4D5	195 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	ZNF418	Q8TF45	676 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	PCNP	Q8WW12	178 aa	Known RBP	7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	RAB24	Q969Q5	203 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	HSPB9	Q9BQS6	159 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	TREM1	Q9NP99	234 aa		7.47	□□□□□ -1.21
TPM3-222	ENST00000515609	TMEM167B	Q9NRX6	74 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms