RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ODF3L2Q3SX64 289 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 RBPMSQ93062 196 aaKnown RBP10.15□□□□□ -0.78
TCOF1-215ENST00000515516 RTBDNQ9BSG5 229 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-215ENST00000515516 CACFD1Q9UGQ2 172 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 SCP2D1Q9UJQ7 156 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 KCNIP3Q9Y2W7 256 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 PUS1Q9Y606 427 aaKnown RBP eCLIP10.15□□□□□ -0.78
TCOF1-215ENST00000515516 RPS10-NUDT3A0A1W2PQS6 291 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 TMEM50AO95807 157 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 HTR2BP41595 481 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 TMEM268Q5VZI3 342 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 SELENOHQ8IZQ5 122 aaKnown RBP10.14□□□□□ -0.79
TCOF1-215ENST00000515516 GBGT1Q8N5D6 347 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 OR51S1Q8NGJ8 323 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 OR4C16Q8NGL9 310 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 DYNC2LI1Q8TCX1 351 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 TMEM230Q96A57 120 aa10.14□□□□□ -0.79
TCOF1-215ENST00000515516 NARS2Q96I59 477 aaKnown RBP10.14□□□□□ -0.79
TCOF1-215ENST00000515516 HEYLQ9NQ87 328 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-215ENST00000515516 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
TCOF1-215ENST00000515516 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 A0A0G2JRQ6 117 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 A0A1W2PS18 150 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 CRYM-AS1A6NIL9 109 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 CEBPZOSA8MTT3 80 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 GSTZ1O43708 216 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-215ENST00000515516 CLN5O75503 358 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 NPPCP23582 126 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 RPL5P46777 297 aaKnown RBP10.13□□□□□ -0.79
TCOF1-215ENST00000515516 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 PVRIGQ6DKI7 326 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 Q6ZRM9 215 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 WFDC3Q8IUB2 231 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 OR4X1Q8NH49 305 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 GLYATL2Q8WU03 294 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 METTL26Q96S19 204 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 MCUBQ9NWR8 336 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 CACNG5Q9UF02 275 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 GPR132Q9UNW8 380 aa10.13□□□□□ -0.79
TCOF1-215ENST00000515516 IGHV3-66A0A0C4DH42 116 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 ANKRD20A5PA0PJZ0 165 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 CXorf65A6NEN9 183 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 FABP12A6NFH5 140 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 FAM90A2PQ658T7 463 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 NOXA1Q86UR1 476 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 TMEM217Q8N7C4 229 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 ST8SIA2Q92186 375 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 GPR146Q96CH1 333 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 RNF183Q96D59 192 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 ZNF414Q96IQ9 312 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 VSIRQ9H7M9 311 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
TCOF1-215ENST00000515516 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 MPTX1A8MV57 137 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 DFFBO76075 338 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 ANXA3P12429 323 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 FAUP35544 74 aaKnown RBP10.11□□□□□ -0.79
TCOF1-215ENST00000515516 AARDQ4LEZ3 155 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 LYG2Q86SG7 212 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 MCFD2Q8NI22 146 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 LHFPL5Q8TAF8 219 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 IL22RA2Q969J5 263 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 GRAMD2BQ96HH9 432 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 TMEM56-RWDD3S4R434 201 aa10.11□□□□□ -0.79
TCOF1-215ENST00000515516 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 PIGBOS1A0A0B4J2F0 54 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 A0A1B0GU03 582 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 H3BMQ9 156 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-215ENST00000515516 SULT1A3P0DMM9 295 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 SULT1A4P0DMN0 295 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 SLC25A4P12235 298 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 AKR1C4P17516 323 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 TNFSF8P32971 234 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 EIF2B2P49770 351 aaKnown RBP10.1□□□□□ -0.79
TCOF1-215ENST00000515516 TNFRSF9Q07011 255 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 PMS2P11Q13670 270 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 MLANAQ16655 118 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 BSXQ3C1V8 233 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 C2orf83Q53S99 150 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 ETFRF1Q6IPR1 90 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 SLC24A4Q8NFF2 622 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 RNASEH2CQ8TDP1 164 aaKnown RBP10.1□□□□□ -0.79
TCOF1-215ENST00000515516 Q8WTZ3 238 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 SLIRPQ9GZT3 109 aaKnown RBP10.1□□□□□ -0.79
TCOF1-215ENST00000515516 FNDC4Q9H6D8 234 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-215ENST00000515516 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
TCOF1-215ENST00000515516 TRAV2A0A0B4J234 112 aa10.09□□□□□ -0.79
TCOF1-215ENST00000515516 AP3S2P59780 193 aa10.09□□□□□ -0.79
TCOF1-215ENST00000515516 TMEM187Q14656 261 aa10.09□□□□□ -0.79
TCOF1-215ENST00000515516 ZNF124Q15973 351 aa10.09□□□□□ -0.79
TCOF1-215ENST00000515516 TIGITQ495A1 244 aa10.09□□□□□ -0.79
TCOF1-215ENST00000515516 OR1S2Q8NGQ3 325 aa10.09□□□□□ -0.79
TCOF1-215ENST00000515516 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms