RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 FAM173AQ9BQD7 235 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 TTTY12Q9BZ98 90 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 PRDM14Q9GZV8 571 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 TRAV24A0A0B4J272 114 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 C9JAW5 83 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 MAGEA5P43359 124 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 INSL3P51460 131 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 C3AR1Q16581 482 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 PHLDA2Q53GA4 152 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 TTC32Q5I0X7 151 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 RBMXL3Q8N7X1 1067 aaKnown RBP6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 STPG3Q8N7X2 389 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 MRPL24Q96A35 216 aaKnown RBP6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 KCNS1Q96KK3 526 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 HSD17B10Q99714 261 aaKnown RBP6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 MAP1LC3AQ9H492 121 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 EDA2RQ9HAV5 297 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 RNF223E7ERA6 249 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 H0YJW9 148 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 RBMXP38159 391 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 PCBD1P61457 104 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 KIR3DS1Q14943 382 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF146Q15072 292 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 PSG5Q15238 335 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 FBXL14Q8N1E6 418 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 MBD3L1Q8WWY6 194 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 PRRG4Q9BZD6 226 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 COMMD5Q9GZQ3 224 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 HILPDAQ9Y5L2 63 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 A0A0U1RRA0 63 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 ECI1P42126 302 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 OR1C1Q15619 314 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 TMEM97Q5BJF2 176 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 RBPMS2Q6ZRY4 209 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 CLEC7AQ9BXN2 247 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 A0A1W2PPI3 338 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 FAM24AA6NFZ4 105 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 CD300LBA8K4G0 201 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 CEBPZOSA8MTT3 80 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 SP1P08047 785 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 BCL2P10415 239 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 RPL23P62829 140 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 SRYQ05066 204 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF415Q09FC8 603 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF114Q8NC26 417 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 PLPPR2Q96GM1 343 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 MS4A6AQ9H2W1 248 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 TECRQ9NZ01 308 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 DUSP13Q9UII6 198 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 SHANK1Q9Y566 2161 aa6.17□□□□□ -1.42
PDLIM5-219ENST00000514743 DNAJC13O75165 2243 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 DMXL1Q9Y485 3027 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 TMEM8BA6NDV4 472 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 TMEM250H0YL14 139 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 MRPL33O75394 65 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 MT-CO3P00414 261 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 HLA-DRB5Q30154 266 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 PIGCQ92535 297 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 LINC00477Q96M19 166 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 HS3ST6Q96QI5 342 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 CISD1Q9NZ45 108 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 PRRC2CQ9Y520 2896 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 F8W1H4 67 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF324O75467 553 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 DEDDO75618 318 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 EGR1P18146 543 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 CBLN1P23435 193 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 SRIP30626 198 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 TMEM187Q14656 261 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 OR13A1Q8NGR1 328 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 BAALCQ8WXS3 180 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 TMEM101Q96IK0 257 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 ADTRPQ96IZ2 230 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 OR4C12Q96R67 309 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 MED12LQ86YW9 2145 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 LAMA5O15230 3695 aa6.16□□□□□ -1.42
PDLIM5-219ENST00000514743 PDCD6O75340 191 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 NXPH3O95157 252 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 IGHG4P01861 327 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 EVI2AP22794 236 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 G6PCP35575 357 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 Q0VG73 95 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 SAMD5Q5TGI4 173 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 LYZL2Q7Z4W2 148 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 MDS2Q8NDY4 140 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF488Q96MN9 340 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 THBDP07204 575 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 IFITM1P13164 125 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 HAPLN4Q86UW8 402 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 TPRX1Q8N7U7 411 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 NAA60Q9H7X0 242 aa6.15□□□□□ -1.42
PDLIM5-219ENST00000514743 OR4C46A6NHA9 309 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms