RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 TRAV14DV4A0A0A6YYC5 116 aa17.16■□□□□ 0.34
CLDND1-230ENST00000514537 CCDC160A6NGH7 325 aa17.16■□□□□ 0.34
CLDND1-230ENST00000514537 KLF9Q13886 244 aaPredicted RBP17.16■□□□□ 0.34
CLDND1-230ENST00000514537 TOMM20LQ6UXN7 152 aa17.16■□□□□ 0.34
CLDND1-230ENST00000514537 RNF2Q99496 336 aa17.16■□□□□ 0.34
CLDND1-230ENST00000514537 GGTLC1Q9BX51 225 aa17.16■□□□□ 0.34
CLDND1-230ENST00000514537 RBM38Q9H0Z9 239 aaKnown RBP17.16■□□□□ 0.34
CLDND1-230ENST00000514537 FNDC4Q9H6D8 234 aaPredicted RBP17.16■□□□□ 0.34
CLDND1-230ENST00000514537 V9GYH0 126 aa17.16■□□□□ 0.34
CLDND1-230ENST00000514537 LOC102724200A0A096LPH7 203 aaPredicted RBP17.15■□□□□ 0.34
CLDND1-230ENST00000514537 MLANAQ16655 118 aa17.15■□□□□ 0.34
CLDND1-230ENST00000514537 TRIM63Q969Q1 353 aa17.15■□□□□ 0.34
CLDND1-230ENST00000514537 FAM110AQ9BQ89 295 aa17.15■□□□□ 0.34
CLDND1-230ENST00000514537 MRPL36Q9P0J6 103 aaKnown RBP17.15■□□□□ 0.34
CLDND1-230ENST00000514537 OR4C46A6NHA9 309 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 HTR2BP41595 481 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 ODF3L2Q3SX64 289 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 PYDC2Q56P42 97 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 ZNF600Q6ZNG1 722 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 PRR13Q9NZ81 148 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 UBQLN2Q9UHD9 624 aa17.14■□□□□ 0.33
CLDND1-230ENST00000514537 CSMD3Q7Z407 3707 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 IGHV3-49A0A0A0MS15 119 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 CLN5O75503 358 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 AKR1C4P17516 323 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 FAUP35544 74 aaKnown RBP17.13■□□□□ 0.33
CLDND1-230ENST00000514537 OPRK1P41145 380 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 SUPT4H1P63272 117 aaKnown RBP17.13■□□□□ 0.33
CLDND1-230ENST00000514537 OR4X1Q8NH49 305 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 GINS3Q9BRX5 216 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 ZFAND3Q9H8U3 227 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 HEYLQ9NQ87 328 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-230ENST00000514537 CACFD1Q9UGQ2 172 aa17.13■□□□□ 0.33
CLDND1-230ENST00000514537 PUS1Q9Y606 427 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLDND1-230ENST00000514537 S100A5P33763 92 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 AP3S2P59780 193 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 ZNF79Q15937 498 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 C2orf83Q53S99 150 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 FAM90A2PQ658T7 463 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 ZFAND6Q6FIF0 208 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 CCDC190Q86UF4 302 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 TOMM5Q8N4H5 51 aa17.12■□□□□ 0.33
CLDND1-230ENST00000514537 IGHV3OR16-13A0A075B7E8 117 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 IGHV3-74A0A0B4J1X5 117 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 A0A0B4J2A0 478 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 A0A1B0GU03 582 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 ZNF701M0R085 212 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-230ENST00000514537 SULT1A3P0DMM9 295 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 SULT1A4P0DMN0 295 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 NMSQ5H8A3 153 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 VSIRQ9H7M9 311 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 SHPKQ9UHJ6 478 aa17.11■□□□□ 0.33
CLDND1-230ENST00000514537 CEBPZOSA8MTT3 80 aa17.1■□□□□ 0.33
CLDND1-230ENST00000514537 LYZL2Q7Z4W2 148 aa17.1■□□□□ 0.33
CLDND1-230ENST00000514537 RYR2Q92736 4967 aa17.1■□□□□ 0.33
CLDND1-230ENST00000514537 RPS10-NUDT3A0A1W2PQS6 291 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 APOHP02749 345 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-230ENST00000514537 CD5P06127 495 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 ANXA3P12429 323 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 BMI1P35226 326 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 CCR6P51684 374 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 SRPXP78539 464 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 LGI3Q8N145 548 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 LILRB2Q8N423 598 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 SLC24A4Q8NFF2 622 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 RNASEH2CQ8TDP1 164 aaKnown RBP17.09■□□□□ 0.33
CLDND1-230ENST00000514537 TMEM170AQ8WVE7 144 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 ST8SIA2Q92186 375 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 OVOL2Q9BRP0 275 aa17.09■□□□□ 0.33
CLDND1-230ENST00000514537 TENM2Q9NT68 2774 aa17.08■□□□□ 0.33
CLDND1-230ENST00000514537 TRAV30A0A087WSZ9 112 aa17.08■□□□□ 0.32
CLDND1-230ENST00000514537 NXPH3O95157 252 aa17.08■□□□□ 0.32
CLDND1-230ENST00000514537 IGKV1-17P01599 117 aa17.08■□□□□ 0.32
CLDND1-230ENST00000514537 SCGB2A1O75556 95 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 APOC4P55056 127 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 CMC4P56277 68 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-230ENST00000514537 SMCO1Q147U7 214 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 TMEM128Q5BJH2 165 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 PRSS54Q6PEW0 395 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 TCF24Q7RTU0 167 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 HSPB7Q9UBY9 170 aa17.07■□□□□ 0.32
CLDND1-230ENST00000514537 IGKV3-7A0A075B6H7 116 aa17.06■□□□□ 0.32
CLDND1-230ENST00000514537 SLC25A4P12235 298 aa17.06■□□□□ 0.32
CLDND1-230ENST00000514537 TFPI2P48307 235 aa17.06■□□□□ 0.32
CLDND1-230ENST00000514537 TNFRSF9Q07011 255 aa17.06■□□□□ 0.32
CLDND1-230ENST00000514537 TIGITQ495A1 244 aa17.06■□□□□ 0.32
CLDND1-230ENST00000514537 TMED4Q7Z7H5 227 aa17.06■□□□□ 0.32
CLDND1-230ENST00000514537 SLC25A21Q9BQT8 299 aaPredicted RBP17.06■□□□□ 0.32
CLDND1-230ENST00000514537 PIGBOS1A0A0B4J2F0 54 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 IGHV3-66A0A0C4DH42 116 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 KIR2DL5BA0A0G2JN68 375 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 KIR2DL5BA0A0G2JPC4 375 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 DFFBO76075 338 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 NPPCP23582 126 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 NPY1RP25929 384 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 PAFAH1B2P68402 229 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 Q6ZWC4 215 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 NOXA1Q86UR1 476 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 APRG1Q8IVJ8 170 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms